Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 SMG1P4-204ENST00000523028 4131 ntBASIC6.05□□□□□ -1.44
SCAPERQ9BY12 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
SCAPERQ9BY12 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SCAPERQ9BY12 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
SCAPERQ9BY12 HMGB3P19-201ENST00000403971 560 ntBASIC6.05□□□□□ -1.44
SCAPERQ9BY12 RN7SKP177-201ENST00000410567 355 ntBASIC6.05□□□□□ -1.44
SCAPERQ9BY12 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SCAPERQ9BY12 AL590609.2-201ENST00000421430 368 ntBASIC6.05□□□□□ -1.44
SCAPERQ9BY12 AL139247.1-201ENST00000422768 325 ntBASIC6.05□□□□□ -1.44
SCAPERQ9BY12 DEFB109F-201ENST00000491870 277 ntBASIC6.05□□□□□ -1.44
SCAPERQ9BY12 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.05□□□□□ -1.44
SCAPERQ9BY12 WBP1LP4-201ENST00000505043 344 ntBASIC6.05□□□□□ -1.44
SCAPERQ9BY12 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.05□□□□□ -1.44
SCAPERQ9BY12 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC6.05□□□□□ -1.44
SCAPERQ9BY12 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.05□□□□□ -1.44
SCAPERQ9BY12 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.05□□□□□ -1.44
SCAPERQ9BY12 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.05□□□□□ -1.44
SCAPERQ9BY12 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC6.05□□□□□ -1.44
SCAPERQ9BY12 MIR432-201ENST00000606207 94 ntBASIC6.05□□□□□ -1.44
SCAPERQ9BY12 AP001002.2-201ENST00000625137 386 ntBASIC6.05□□□□□ -1.44
SCAPERQ9BY12 AF001550.2-201ENST00000636643 217 ntBASIC6.05□□□□□ -1.44
SCAPERQ9BY12 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SCAPERQ9BY12 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SCAPERQ9BY12 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SCAPERQ9BY12 AL049781.1-201ENST00000623195 3585 ntBASIC6.05□□□□□ -1.44
SCAPERQ9BY12 AL022311.1-201ENST00000623726 19416 ntBASIC6.05□□□□□ -1.44
SCAPERQ9BY12 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SCAPERQ9BY12 RNU2-65P-201ENST00000410162 185 ntBASIC6.04□□□□□ -1.44
SCAPERQ9BY12 TRIM60P17-201ENST00000415181 719 ntBASIC6.04□□□□□ -1.44
SCAPERQ9BY12 RBMY1KP-201ENST00000423480 476 ntBASIC6.04□□□□□ -1.44
SCAPERQ9BY12 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.04□□□□□ -1.44
SCAPERQ9BY12 HSPD1P21-201ENST00000436541 245 ntBASIC6.04□□□□□ -1.44
SCAPERQ9BY12 RPS27AP15-201ENST00000447672 466 ntBASIC6.04□□□□□ -1.44
SCAPERQ9BY12 AC018635.1-201ENST00000468292 1030 ntBASIC6.04□□□□□ -1.44
SCAPERQ9BY12 PPIAP15-201ENST00000479662 484 ntBASIC6.04□□□□□ -1.44
SCAPERQ9BY12 AC106707.2-201ENST00000484182 374 ntBASIC6.04□□□□□ -1.44
SCAPERQ9BY12 GMPSP1-201ENST00000514075 579 ntBASIC6.04□□□□□ -1.44
SCAPERQ9BY12 RNU7-143P-201ENST00000516781 65 ntBASIC6.04□□□□□ -1.44
SCAPERQ9BY12 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.04□□□□□ -1.44
SCAPERQ9BY12 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.04□□□□□ -1.44
SCAPERQ9BY12 AC124068.1-201ENST00000563131 678 ntBASIC6.04□□□□□ -1.44
SCAPERQ9BY12 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC6.04□□□□□ -1.44
SCAPERQ9BY12 AL596275.2-204ENST00000641628 552 ntBASIC6.04□□□□□ -1.44
SCAPERQ9BY12 AL596275.2-206ENST00000641957 626 ntBASIC6.04□□□□□ -1.44
SCAPERQ9BY12 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SCAPERQ9BY12 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SCAPERQ9BY12 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SCAPERQ9BY12 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
SCAPERQ9BY12 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 RNA5SP22-201ENST00000365393 109 ntBASIC6.03□□□□□ -1.44
SCAPERQ9BY12 OR52E6-202ENST00000379946 954 ntBASIC6.03□□□□□ -1.44
SCAPERQ9BY12 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 MAP1LC3BP1-201ENST00000417653 379 ntBASIC6.03□□□□□ -1.44
SCAPERQ9BY12 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 AL133244.1-201ENST00000456007 258 ntBASIC6.03□□□□□ -1.44
SCAPERQ9BY12 RPS3AP6-201ENST00000484430 795 ntBASIC6.03□□□□□ -1.44
SCAPERQ9BY12 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 AC063950.1-201ENST00000552036 308 ntBASIC6.03□□□□□ -1.44
SCAPERQ9BY12 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 AC092354.2-201ENST00000607786 514 ntBASIC6.03□□□□□ -1.44
SCAPERQ9BY12 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SCAPERQ9BY12 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SCAPERQ9BY12 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.02□□□□□ -1.45
SCAPERQ9BY12 MAPK10-320ENST00000641462 6696 ntBASIC6.02□□□□□ -1.45
SCAPERQ9BY12 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.02□□□□□ -1.45
SCAPERQ9BY12 MIR634-201ENST00000385208 97 ntBASIC6.02□□□□□ -1.45
SCAPERQ9BY12 MTND2P15-201ENST00000418575 892 ntBASIC6.02□□□□□ -1.45
SCAPERQ9BY12 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC6.02□□□□□ -1.45
SCAPERQ9BY12 AL591419.1-201ENST00000427423 339 ntBASIC6.02□□□□□ -1.45
SCAPERQ9BY12 CYCSP32-201ENST00000440548 321 ntBASIC6.02□□□□□ -1.45
SCAPERQ9BY12 AC087369.1-201ENST00000520775 996 ntBASIC6.02□□□□□ -1.45
SCAPERQ9BY12 RPL21P12-201ENST00000559810 515 ntBASIC6.02□□□□□ -1.45
SCAPERQ9BY12 QTRT1P1-201ENST00000604344 1078 ntBASIC6.02□□□□□ -1.45
SCAPERQ9BY12 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.02□□□□□ -1.45
SCAPERQ9BY12 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
SCAPERQ9BY12 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SCAPERQ9BY12 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SCAPERQ9BY12 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SCAPERQ9BY12 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SCAPERQ9BY12 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SCAPERQ9BY12 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC6.02□□□□□ -1.45
SCAPERQ9BY12 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.02□□□□□ -1.45
SCAPERQ9BY12 AL031595.2-201ENST00000624215 19071 ntBASIC6.02□□□□□ -1.45
SCAPERQ9BY12 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms