Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.12□□□□□ -1.75
SSX3Q99909 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.12□□□□□ -1.75
SSX3Q99909 MIR4436B2-201ENST00000581415 91 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 MIR4436B1-201ENST00000583272 91 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.12□□□□□ -1.75
SSX3Q99909 AC005014.3-201ENST00000605985 190 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.12□□□□□ -1.75
SSX3Q99909 AC096586.1-201ENST00000610267 561 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.12□□□□□ -1.75
SSX3Q99909 AL109620.1-201ENST00000618738 1197 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSX3Q99909 AL669942.2-201ENST00000620352 697 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.12□□□□□ -1.75
SSX3Q99909 AC055839.1-201ENST00000634467 498 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.12□□□□□ -1.75
SSX3Q99909 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSX3Q99909 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.12□□□□□ -1.75
SSX3Q99909 AC068254.2-201ENST00000623938 3577 ntBASIC4.12□□□□□ -1.75
SSX3Q99909 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSX3Q99909 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.12□□□□□ -1.75
SSX3Q99909 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSX3Q99909 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
SSX3Q99909 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSX3Q99909 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SSX3Q99909 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSX3Q99909 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.12□□□□□ -1.75
SSX3Q99909 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.11□□□□□ -1.75
SSX3Q99909 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.11□□□□□ -1.75
SSX3Q99909 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSX3Q99909 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSX3Q99909 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX3Q99909 AC015813.6-201ENST00000624409 5808 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSX3Q99909 AC017104.4-201ENST00000636283 1592 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSX3Q99909 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSX3Q99909 AL132640.2-201ENST00000559968 1698 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 RNA5SP123-201ENST00000363244 119 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 RN7SKP103-201ENST00000363848 320 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AL133412.1-201ENST00000380194 2992 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 SNORA66-201ENST00000384792 133 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SSX3Q99909 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.11□□□□□ -1.75
SSX3Q99909 MIR937-201ENST00000401271 86 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.11□□□□□ -1.75
SSX3Q99909 Z97832.1-201ENST00000402490 328 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AC092745.2-202ENST00000411880 369 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.11□□□□□ -1.75
SSX3Q99909 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.11□□□□□ -1.75
SSX3Q99909 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX3Q99909 FABP7P2-201ENST00000429946 379 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX3Q99909 CDY14P-201ENST00000431260 1014 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX3Q99909 RPS26P40-201ENST00000435209 294 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 PRPF38AP2-201ENST00000438179 851 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 CDY12P-201ENST00000440679 1015 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX3Q99909 CDY13P-201ENST00000445813 1015 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX3Q99909 H2AFZP5-201ENST00000446960 382 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 CDY23P-201ENST00000451661 1014 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 CEACAMP6-201ENST00000452007 574 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.11□□□□□ -1.75
SSX3Q99909 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX3Q99909 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
SSX3Q99909 RN7SL814P-201ENST00000487715 300 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AC012170.1-201ENST00000495139 359 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AC097173.1-201ENST00000505862 819 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 COX6B1P5-201ENST00000509843 249 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX3Q99909 AC018797.3-201ENST00000513388 1241 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AC110775.1-201ENST00000513721 462 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX3Q99909 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX3Q99909 OR7E128P-201ENST00000532736 1024 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.11□□□□□ -1.75
SSX3Q99909 NMNAT1P1-201ENST00000554095 876 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX3Q99909 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.11□□□□□ -1.75
SSX3Q99909 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX3Q99909 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSX3Q99909 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.11□□□□□ -1.75
SSX3Q99909 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.11□□□□□ -1.75
SSX3Q99909 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.11□□□□□ -1.75
SSX3Q99909 AC011487.3-201ENST00000593607 453 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.11□□□□□ -1.75
SSX3Q99909 BNIP3P32-201ENST00000600015 554 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AC078880.5-201ENST00000617845 421 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AC068880.4-201ENST00000623082 495 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
SSX3Q99909 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSX3Q99909 AL136520.1-201ENST00000600311 1322 ntBASIC4.11□□□□□ -1.75
SSX3Q99909 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSX3Q99909 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.11□□□□□ -1.75
SSX3Q99909 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.11□□□□□ -1.75
SSX3Q99909 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.11□□□□□ -1.75
SSX3Q99909 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.11□□□□□ -1.75
SSX3Q99909 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms