Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 MIR8069-2-201ENST00000621412 86 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC6.48□□□□□ -1.37
IFT140Q96RY7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC6.48□□□□□ -1.37
IFT140Q96RY7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
IFT140Q96RY7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
IFT140Q96RY7 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.48□□□□□ -1.37
IFT140Q96RY7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
IFT140Q96RY7 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
IFT140Q96RY7 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.48□□□□□ -1.37
IFT140Q96RY7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC6.48□□□□□ -1.37
IFT140Q96RY7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
IFT140Q96RY7 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 RNA5SP120-201ENST00000410900 112 ntBASIC6.47□□□□□ -1.37
IFT140Q96RY7 PGBD4P8-201ENST00000412993 562 ntBASIC6.47□□□□□ -1.37
IFT140Q96RY7 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 MTND6P5-201ENST00000448266 512 ntBASIC6.47□□□□□ -1.37
IFT140Q96RY7 UBDP1-202ENST00000457888 382 ntBASIC6.47□□□□□ -1.37
IFT140Q96RY7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 AC064801.1-201ENST00000612025 407 ntBASIC6.47□□□□□ -1.37
IFT140Q96RY7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
IFT140Q96RY7 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
IFT140Q96RY7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
IFT140Q96RY7 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 SNORD105B-201ENST00000458770 79 ntBASIC6.47□□□□□ -1.37
IFT140Q96RY7 RN7SL807P-201ENST00000470923 297 ntBASIC6.47□□□□□ -1.37
IFT140Q96RY7 RPL23AP65-201ENST00000475608 468 ntBASIC6.47□□□□□ -1.37
IFT140Q96RY7 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.47□□□□□ -1.37
IFT140Q96RY7 AC119674.1-207ENST00000641355 633 ntBASIC6.47□□□□□ -1.37
IFT140Q96RY7 OR6C71P-202ENST00000641886 1107 ntBASIC6.47□□□□□ -1.37
IFT140Q96RY7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
IFT140Q96RY7 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.37
IFT140Q96RY7 EOGT-210ENST00000615922 1931 ntBASIC6.46□□□□□ -1.37
IFT140Q96RY7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.46□□□□□ -1.37
IFT140Q96RY7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
IFT140Q96RY7 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
IFT140Q96RY7 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
IFT140Q96RY7 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.46□□□□□ -1.38
IFT140Q96RY7 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
IFT140Q96RY7 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.46□□□□□ -1.38
IFT140Q96RY7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
IFT140Q96RY7 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.46□□□□□ -1.38
IFT140Q96RY7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
IFT140Q96RY7 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
IFT140Q96RY7 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.46□□□□□ -1.38
IFT140Q96RY7 AC005300.1-201ENST00000428401 373 ntBASIC6.46□□□□□ -1.38
IFT140Q96RY7 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC6.46□□□□□ -1.38
IFT140Q96RY7 RPL21P11-201ENST00000461458 483 ntBASIC6.46□□□□□ -1.38
IFT140Q96RY7 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC6.46□□□□□ -1.38
IFT140Q96RY7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.46□□□□□ -1.38
IFT140Q96RY7 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
IFT140Q96RY7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6.46□□□□□ -1.38
IFT140Q96RY7 AC107993.1-201ENST00000591343 684 ntBASIC6.46□□□□□ -1.38
IFT140Q96RY7 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.46□□□□□ -1.38
IFT140Q96RY7 AL137849.1-201ENST00000604767 169 ntBASIC6.46□□□□□ -1.38
IFT140Q96RY7 MIR7702-201ENST00000621931 59 ntBASIC6.46□□□□□ -1.38
IFT140Q96RY7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
IFT140Q96RY7 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC6.46□□□□□ -1.38
IFT140Q96RY7 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
IFT140Q96RY7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.45□□□□□ -1.38
IFT140Q96RY7 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
IFT140Q96RY7 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
IFT140Q96RY7 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
IFT140Q96RY7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
IFT140Q96RY7 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
IFT140Q96RY7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
IFT140Q96RY7 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
IFT140Q96RY7 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
IFT140Q96RY7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC6.45□□□□□ -1.38
IFT140Q96RY7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.45□□□□□ -1.38
IFT140Q96RY7 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.45□□□□□ -1.38
IFT140Q96RY7 HIGD1AP18-201ENST00000520730 278 ntBASIC6.45□□□□□ -1.38
IFT140Q96RY7 AC138832.1-201ENST00000522871 556 ntBASIC6.45□□□□□ -1.38
IFT140Q96RY7 AL359219.2-201ENST00000555184 348 ntBASIC6.45□□□□□ -1.38
IFT140Q96RY7 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.45□□□□□ -1.38
IFT140Q96RY7 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.45□□□□□ -1.38
IFT140Q96RY7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
IFT140Q96RY7 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
IFT140Q96RY7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
IFT140Q96RY7 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
IFT140Q96RY7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
IFT140Q96RY7 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.44□□□□□ -1.38
IFT140Q96RY7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
IFT140Q96RY7 RPL7P60-201ENST00000397636 735 ntBASIC6.44□□□□□ -1.38
IFT140Q96RY7 AJ239321.1-201ENST00000424255 564 ntBASIC6.44□□□□□ -1.38
IFT140Q96RY7 OR2AH1P-201ENST00000425717 928 ntBASIC6.44□□□□□ -1.38
IFT140Q96RY7 AC008481.1-201ENST00000463278 396 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms