Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 AC007842.1-201ENST00000597336 2039 ntBASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SYNGAP1Q96PV0 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 RPL21P132-201ENST00000331267 462 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AL159987.1-201ENST00000347911 293 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 RNA5SP131-201ENST00000365452 119 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 Y_RNA.372-201ENST00000365599 102 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 RNU6-1009P-201ENST00000390996 107 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 CCNG1P1-201ENST00000406783 885 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 MIR1286-201ENST00000408112 78 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AC016397.1-201ENST00000412463 242 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 RPL17P12-201ENST00000413391 526 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AC093716.1-201ENST00000435923 377 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 BX679664.2-201ENST00000439282 283 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AL831737.1-201ENST00000441288 271 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 RPL35AP28-201ENST00000459730 331 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AC079080.1-201ENST00000479841 822 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AC004453.1-201ENST00000487895 408 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AC069439.1-201ENST00000494739 167 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AC105252.1-201ENST00000503089 286 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AC021678.3-201ENST00000517893 476 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 UBE2FP2-201ENST00000566646 462 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AC063977.5-201ENST00000601044 974 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AC005084.1-201ENST00000605160 304 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AL355974.3-201ENST00000617383 467 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 FAM157B-203ENST00000639350 358 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AC130304.1-201ENST00000622942 2385 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 MRE11P1-201ENST00000464884 2127 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 CASC19-280ENST00000642102 1351 ntBASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNGAP1Q96PV0 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 RNU4-76P-201ENST00000364509 141 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 GNG5P2-201ENST00000372054 207 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 RNU6-1263P-201ENST00000384601 106 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 OR2W4P-201ENST00000406496 926 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 AC092745.2-202ENST00000411880 369 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 PTP4A1P1-201ENST00000420539 515 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 FTH1P16-201ENST00000435241 552 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 AC015983.1-201ENST00000441577 373 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 AC244505.5-201ENST00000443639 207 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 DPPA3P1-201ENST00000448050 469 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 AL034418.1-201ENST00000448675 860 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 RN7SL583P-201ENST00000475692 287 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 RPL32P33-201ENST00000487023 394 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 RN7SL547P-201ENST00000490793 290 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 MTCYBP43-201ENST00000513621 740 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 OR5AL2P-201ENST00000532185 920 ntBASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.55□□□□□ -1.36
SYNGAP1Q96PV0 BNIP3P9-201ENST00000603714 553 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms