Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 MTND3P12-201ENST00000559068 328 ntBASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 AC116553.2-201ENST00000564203 463 ntBASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 MIR5708-201ENST00000579723 85 ntBASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 AC099676.1-201ENST00000608886 657 ntBASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 AP002782.1-201ENST00000623107 614 ntBASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 AC091953.3-201ENST00000623220 236 ntBASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 AP001784.1-201ENST00000624107 428 ntBASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 LINC02211-204ENST00000642024 1070 ntBASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CHMP4CQ96CF2 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CHMP4CQ96CF2 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
CHMP4CQ96CF2 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.96□□□□□ -1.45
CHMP4CQ96CF2 AC000367.1-201ENST00000452711 1766 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 RNU4-28P-201ENST00000364739 141 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 MTCO2P31-201ENST00000402702 684 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 AL079342.2-201ENST00000403367 482 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 RN7SKP199-201ENST00000410325 305 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 GTF2IP5-201ENST00000414608 731 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 OR4K6P-201ENST00000416478 897 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 AC005005.2-201ENST00000420779 380 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 OR2AM1P-201ENST00000422137 422 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 RPL12P28-201ENST00000430852 489 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 NANOGP2-201ENST00000435391 727 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 AC097484.1-201ENST00000471148 389 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 AC083982.1-201ENST00000485679 344 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 AC023632.1-201ENST00000518463 375 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 OR4U1P-201ENST00000554958 912 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 MTND3P13-201ENST00000574391 343 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 MIR3934-201ENST00000579806 107 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 NIFKP6-201ENST00000598115 845 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 GAS5-AS1-201ENST00000602767 694 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 NTAN1P1-201ENST00000603150 646 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 ELOCP35-201ENST00000604289 336 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 CDRT1-208ENST00000630868 794 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 AC073869.10-201ENST00000642016 354 ntBASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CHMP4CQ96CF2 AC100778.3-201ENST00000580060 1750 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AC025574.1-201ENST00000554784 1653 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AC107068.1-201ENST00000563286 4218 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 RN7SKP95-201ENST00000362860 303 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 RNU4-92P-201ENST00000363783 136 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 RNA5SP428-201ENST00000365129 132 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 SNORA70.10-201ENST00000384515 134 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 U3.32-201ENST00000408116 212 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 CTSL3P-202ENST00000412179 788 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 MTND2P16-201ENST00000419987 799 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 DDX39BP1-205ENST00000422507 192 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 RPL7P4-203ENST00000430239 730 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 PPIAP13-201ENST00000434706 478 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms