Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 SNORD65-201ENST00000391079 73 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 MIR937-201ENST00000401271 86 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AMZ2P2-201ENST00000406819 1057 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AC092832.1-201ENST00000422934 400 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AL353748.1-201ENST00000440753 474 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AC006511.1-201ENST00000470614 315 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AC087385.1-201ENST00000475062 312 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AC106872.2-201ENST00000494303 480 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AC093720.1-201ENST00000505681 714 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AC006499.6-201ENST00000511169 607 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AC006064.5-201ENST00000541782 248 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AC069240.1-201ENST00000548774 375 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AL109766.1-201ENST00000555080 552 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 NPM1P47-201ENST00000560843 856 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AC073429.2-201ENST00000569694 1444 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AC022884.3-201ENST00000579571 248 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AC068790.5-201ENST00000602741 355 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 MIR432-201ENST00000606207 94 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 MIR6780A-201ENST00000615089 68 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AC074276.2-201ENST00000619891 348 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 AC096656.1-201ENST00000623826 1364 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AL132640.2-201ENST00000559968 1698 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 RNA5SP388-201ENST00000362584 119 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 SNORD74.4-201ENST00000364129 80 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 RPL23AP59-201ENST00000399415 461 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 MFSD13B-201ENST00000420133 1290 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 RBMY1KP-201ENST00000423480 476 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AC146944.2-203ENST00000502493 354 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AC025554.1-201ENST00000505641 188 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AC111000.3-201ENST00000508057 576 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AC139495.1-202ENST00000513164 354 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 RNA5SP309-201ENST00000516670 106 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AC124068.1-201ENST00000563131 678 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AC119501.1-201ENST00000603646 475 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AC064801.1-201ENST00000612025 407 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AL445363.3-201ENST00000623080 671 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AC002044.3-201ENST00000623314 541 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AC138907.10-201ENST00000623708 983 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AC008013.2-202ENST00000637965 364 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 SAGE2P-201ENST00000420011 2126 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 AC025125.1-201ENST00000624743 1922 ntBASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CLHC1Q8NHS4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 Z82217.1-201ENST00000625157 8149 ntBASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLHC1Q8NHS4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms