Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.14□□□□□ -1.59
RNF220Q5VTB9 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RNF220Q5VTB9 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 RNU1-85P-201ENST00000364127 164 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 RNU6-1293P-201ENST00000384077 107 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 MIR506-201ENST00000384998 124 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AL590084.2-201ENST00000401481 382 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AL009179.1-201ENST00000406085 265 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AC245060.4-201ENST00000413293 1121 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AC004022.2-201ENST00000413824 193 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 TIMM9P2-201ENST00000419324 266 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AC007161.1-204ENST00000423039 460 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AL593851.1-201ENST00000426171 157 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 UBE2D3P1-201ENST00000436669 444 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 CYCSP12-201ENST00000437729 300 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 RPS26P56-201ENST00000444468 240 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 CYCSP24-201ENST00000445119 316 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AL606662.1-201ENST00000445763 553 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 RSL24D1P3-201ENST00000449255 495 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 HLA-DPA3-207ENST00000454398 229 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AC011476.1-201ENST00000466725 307 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 RPL7P41-201ENST00000485823 957 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 RN7SL649P-201ENST00000496974 275 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 MTND1P22-201ENST00000510572 951 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 HMGN1P9-201ENST00000515212 298 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 HNRNPKP5-201ENST00000515300 253 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 RNA5SP271-201ENST00000516700 88 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 IGBP1P1-201ENST00000554337 1009 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AC004948.1-201ENST00000609858 672 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AC015914.2-201ENST00000618167 288 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 RNU6-156P-201ENST00000621869 107 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AC120349.2-201ENST00000625002 298 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AP000526.1-201ENST00000603308 1388 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 CYP1D1P-201ENST00000416662 1433 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.13□□□□□ -1.59
RNF220Q5VTB9 AC006210.2-201ENST00000367074 1545 ntBASIC5.13□□□□□ -1.59
RNF220Q5VTB9 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 AC090971.4-201ENST00000560291 1800 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 RNU6-216P-201ENST00000363282 104 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 RNA5SP131-201ENST00000365452 119 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 RN7SKP16-201ENST00000410180 299 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 AC062016.2-201ENST00000420950 676 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 AC234779.1-201ENST00000425910 285 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 AC002069.1-201ENST00000429649 1159 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 MTCYBP3-201ENST00000445588 1137 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 BTF3P6-201ENST00000448054 499 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 RPL7P38-201ENST00000488396 739 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 ARL4AP1-201ENST00000503220 705 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 AC105313.1-201ENST00000509121 353 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms