Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC119674.1-207ENST00000641355 633 ntBASIC2.57□□□□□ -2
VPS13DQ5THJ4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC2.57□□□□□ -2
VPS13DQ5THJ4 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
VPS13DQ5THJ4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.57□□□□□ -2
VPS13DQ5THJ4 AL079305.1-201ENST00000623159 3008 ntBASIC2.57□□□□□ -2
VPS13DQ5THJ4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.57□□□□□ -2
VPS13DQ5THJ4 AP000542.2-201ENST00000623199 6179 ntBASIC2.57□□□□□ -2
VPS13DQ5THJ4 RNA5SP267-201ENST00000364893 126 ntBASIC2.57□□□□□ -2
VPS13DQ5THJ4 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.57□□□□□ -2
VPS13DQ5THJ4 RNA5SP208-201ENST00000516156 78 ntBASIC2.57□□□□□ -2
VPS13DQ5THJ4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.57□□□□□ -2
VPS13DQ5THJ4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC2.57□□□□□ -2
VPS13DQ5THJ4 AC006116.10-201ENST00000591836 581 ntBASIC2.57□□□□□ -2
VPS13DQ5THJ4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.57□□□□□ -2
VPS13DQ5THJ4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
VPS13DQ5THJ4 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC2.57□□□□□ -2
VPS13DQ5THJ4 SPATA31D2P-201ENST00000429999 4388 ntBASIC2.57□□□□□ -2
VPS13DQ5THJ4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC2.57□□□□□ -2
VPS13DQ5THJ4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC2.57□□□□□ -2
VPS13DQ5THJ4 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VPS13DQ5THJ4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
VPS13DQ5THJ4 BCLAF1P2-201ENST00000624956 2609 ntBASIC2.57□□□□□ -2
VPS13DQ5THJ4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC2.57□□□□□ -2
VPS13DQ5THJ4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC2.57□□□□□ -2
VPS13DQ5THJ4 AC025554.1-201ENST00000505641 188 ntBASIC2.57□□□□□ -2
VPS13DQ5THJ4 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.57□□□□□ -2
VPS13DQ5THJ4 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.57□□□□□ -2
VPS13DQ5THJ4 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VPS13DQ5THJ4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
VPS13DQ5THJ4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC2.57□□□□□ -2
VPS13DQ5THJ4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VPS13DQ5THJ4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
VPS13DQ5THJ4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VPS13DQ5THJ4 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC2.57□□□□□ -2
VPS13DQ5THJ4 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VPS13DQ5THJ4 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC2.57□□□□□ -2
VPS13DQ5THJ4 AC125336.1-201ENST00000508893 2827 ntBASIC2.56□□□□□ -2
VPS13DQ5THJ4 RPL7P60-201ENST00000397636 735 ntBASIC2.56□□□□□ -2
VPS13DQ5THJ4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 RPL7P28-201ENST00000437739 740 ntBASIC2.56□□□□□ -2
VPS13DQ5THJ4 RAC1P2-201ENST00000511164 579 ntBASIC2.56□□□□□ -2
VPS13DQ5THJ4 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC2.56□□□□□ -2
VPS13DQ5THJ4 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC2.56□□□□□ -2
VPS13DQ5THJ4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VPS13DQ5THJ4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 AC010285.3-201ENST00000511668 676 ntBASIC2.56□□□□□ -2
VPS13DQ5THJ4 HIGD1AP18-201ENST00000520730 278 ntBASIC2.56□□□□□ -2
VPS13DQ5THJ4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VPS13DQ5THJ4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
VPS13DQ5THJ4 MTHFD2P2-201ENST00000407725 247 ntBASIC2.56□□□□□ -2
VPS13DQ5THJ4 RPS23P10-201ENST00000416185 486 ntBASIC2.56□□□□□ -2
VPS13DQ5THJ4 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 AL353600.1-201ENST00000608148 251 ntBASIC2.56□□□□□ -2
VPS13DQ5THJ4 AC023509.5-201ENST00000617434 807 ntBASIC2.56□□□□□ -2
VPS13DQ5THJ4 CDY3P-201ENST00000454543 1618 ntBASIC2.56□□□□□ -2
VPS13DQ5THJ4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC2.56□□□□□ -2
VPS13DQ5THJ4 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VPS13DQ5THJ4 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC2.56□□□□□ -2
VPS13DQ5THJ4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
VPS13DQ5THJ4 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VPS13DQ5THJ4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.56□□□□□ -2
VPS13DQ5THJ4 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 AC097713.2-201ENST00000430199 356 ntBASIC2.56□□□□□ -2
VPS13DQ5THJ4 PDSS1P2-201ENST00000449397 678 ntBASIC2.56□□□□□ -2
VPS13DQ5THJ4 RPL23AP94-201ENST00000512518 302 ntBASIC2.56□□□□□ -2
VPS13DQ5THJ4 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 AC067852.3-201ENST00000589177 561 ntBASIC2.56□□□□□ -2
VPS13DQ5THJ4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 AL117339.4-201ENST00000608335 7063 ntBASIC2.56□□□□□ -2
VPS13DQ5THJ4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.56□□□□□ -2
VPS13DQ5THJ4 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VPS13DQ5THJ4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.55□□□□□ -2
VPS13DQ5THJ4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
VPS13DQ5THJ4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
VPS13DQ5THJ4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VPS13DQ5THJ4 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
VPS13DQ5THJ4 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC2.55□□□□□ -2
VPS13DQ5THJ4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC2.55□□□□□ -2
VPS13DQ5THJ4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.55□□□□□ -2
VPS13DQ5THJ4 5S_rRNA.16-201ENST00000612928 119 ntBASIC2.55□□□□□ -2
VPS13DQ5THJ4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms