Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 UQCRBP1-201ENST00000421129 336 ntBASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AL732292.1-201ENST00000426692 226 ntBASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AC011742.1-201ENST00000431448 434 ntBASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AC010326.1-201ENST00000462726 602 ntBASIC3.71□□□□□ -1.82
CCDC58Q4VC31 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 BTF3L4P4-201ENST00000506381 449 ntBASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AC007599.1-201ENST00000568688 1174 ntBASIC3.71□□□□□ -1.82
CCDC58Q4VC31 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AC104662.1-201ENST00000604448 511 ntBASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AC100847.1-201ENST00000611316 481 ntBASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AC004241.3-201ENST00000611728 517 ntBASIC3.71□□□□□ -1.82
CCDC58Q4VC31 AC004943.3-201ENST00000624116 600 ntBASIC3.71□□□□□ -1.82
CCDC58Q4VC31 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CCDC58Q4VC31 BDP1P-201ENST00000582658 1990 ntBASIC3.71□□□□□ -1.82
CCDC58Q4VC31 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 SYT14P1-202ENST00000600441 1448 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 RNU1-18P-201ENST00000363062 164 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 PTMAP5-201ENST00000393073 333 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AC119751.6-201ENST00000416712 186 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 RPL7AP25-201ENST00000423357 805 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AL049610.1-201ENST00000423374 372 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 IFNNP1-201ENST00000429219 553 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AC008072.1-201ENST00000434254 824 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AC092013.1-201ENST00000438795 332 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 RN7SL93P-201ENST00000463035 293 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AP000893.1-201ENST00000474462 794 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AC078785.3-201ENST00000476607 425 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 RPS27AP16-201ENST00000492222 470 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 MIR4716-201ENST00000579628 84 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 MIR3934-201ENST00000579806 107 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 VN1R84P-201ENST00000593697 235 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AC022146.1-201ENST00000595307 847 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AC115286.1-201ENST00000604298 434 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AL354984.3-201ENST00000604803 325 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AC010200.2-201ENST00000605098 235 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AC092653.1-201ENST00000608509 531 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AC244205.2-202ENST00000635781 342 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AC008013.2-202ENST00000637965 364 ntBASIC3.7□□□□□ -1.82
CCDC58Q4VC31 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC58Q4VC31 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 RNA5SP87-201ENST00000384155 118 ntBASIC3.69□□□□□ -1.82
CCDC58Q4VC31 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 HMGB1P32-201ENST00000425971 565 ntBASIC3.69□□□□□ -1.82
CCDC58Q4VC31 AL157831.1-201ENST00000426134 473 ntBASIC3.69□□□□□ -1.82
CCDC58Q4VC31 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC58Q4VC31 RPL36AP13-201ENST00000457490 317 ntBASIC3.69□□□□□ -1.82
CCDC58Q4VC31 RPS3AP41-201ENST00000462701 778 ntBASIC3.69□□□□□ -1.82
CCDC58Q4VC31 RN7SL329P-201ENST00000467740 299 ntBASIC3.69□□□□□ -1.82
CCDC58Q4VC31 AC018635.1-201ENST00000468292 1030 ntBASIC3.69□□□□□ -1.82
CCDC58Q4VC31 AC037198.2-201ENST00000478845 733 ntBASIC3.69□□□□□ -1.82
CCDC58Q4VC31 RPS29P19-201ENST00000479709 171 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms