Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.93□□□□□ -1.78
RFX4Q33E94 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.93□□□□□ -1.78
RFX4Q33E94 AC027176.2-201ENST00000559166 746 ntBASIC3.93□□□□□ -1.78
RFX4Q33E94 AC068714.1-201ENST00000559623 800 ntBASIC3.93□□□□□ -1.78
RFX4Q33E94 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.93□□□□□ -1.78
RFX4Q33E94 RN7SL690P-201ENST00000582087 240 ntBASIC3.93□□□□□ -1.78
RFX4Q33E94 SNX6P1-201ENST00000601728 1224 ntBASIC3.93□□□□□ -1.78
RFX4Q33E94 HMGB1P51-201ENST00000605166 638 ntBASIC3.93□□□□□ -1.78
RFX4Q33E94 AC091953.3-201ENST00000623220 236 ntBASIC3.93□□□□□ -1.78
RFX4Q33E94 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.93□□□□□ -1.78
RFX4Q33E94 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.93□□□□□ -1.78
RFX4Q33E94 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFX4Q33E94 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFX4Q33E94 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RFX4Q33E94 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RFX4Q33E94 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.93□□□□□ -1.78
RFX4Q33E94 FAM35DP-201ENST00000323387 2712 ntBASIC3.93□□□□□ -1.78
RFX4Q33E94 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RFX4Q33E94 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RFX4Q33E94 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.92□□□□□ -1.78
RFX4Q33E94 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
RFX4Q33E94 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RFX4Q33E94 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RFX4Q33E94 MIR7-1-201ENST00000384871 110 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RFX4Q33E94 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.92□□□□□ -1.78
RFX4Q33E94 MTCYBP7-201ENST00000419540 1134 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.92□□□□□ -1.78
RFX4Q33E94 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.92□□□□□ -1.78
RFX4Q33E94 RPS6P12-201ENST00000432491 726 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 AC092013.1-201ENST00000438795 332 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.92□□□□□ -1.78
RFX4Q33E94 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.92□□□□□ -1.78
RFX4Q33E94 AC069277.2-201ENST00000454211 432 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 EIF2S2P4-201ENST00000461070 984 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 RPL7P22-201ENST00000466005 733 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 METTL15P1-201ENST00000481421 1045 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 AC105233.1-201ENST00000498840 781 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RFX4Q33E94 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
RFX4Q33E94 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.92□□□□□ -1.78
RFX4Q33E94 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RFX4Q33E94 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.92□□□□□ -1.78
RFX4Q33E94 OR5BC1P-201ENST00000529327 739 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RFX4Q33E94 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.92□□□□□ -1.78
RFX4Q33E94 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.92□□□□□ -1.78
RFX4Q33E94 AC067805.1-201ENST00000559344 470 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 MIR4270-201ENST00000581799 70 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 AC069061.3-201ENST00000582254 823 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.92□□□□□ -1.78
RFX4Q33E94 AC073111.2-201ENST00000605657 1075 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 AC100847.1-201ENST00000611316 481 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
RFX4Q33E94 AC004825.2-201ENST00000616634 455 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.92□□□□□ -1.78
RFX4Q33E94 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.92□□□□□ -1.78
RFX4Q33E94 AC000123.2-201ENST00000623124 461 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 AL049536.1-201ENST00000625043 744 ntBASIC3.92□□□□□ -1.78
RFX4Q33E94 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.92□□□□□ -1.78
RFX4Q33E94 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
RFX4Q33E94 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RFX4Q33E94 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.92□□□□□ -1.78
RFX4Q33E94 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RFX4Q33E94 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.91□□□□□ -1.78
RFX4Q33E94 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RFX4Q33E94 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RFX4Q33E94 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RFX4Q33E94 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RFX4Q33E94 RNA5SP175-201ENST00000364275 119 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 SNORA70F-201ENST00000384142 135 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 AC097374.1-203ENST00000400783 485 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 ST13P16-201ENST00000401760 781 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 AL139095.3-201ENST00000419672 1203 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 AC007394.1-201ENST00000421941 531 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.91□□□□□ -1.78
RFX4Q33E94 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.91□□□□□ -1.78
RFX4Q33E94 AC087650.1-201ENST00000431445 468 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.91□□□□□ -1.78
RFX4Q33E94 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RFX4Q33E94 Z99127.2-201ENST00000441426 334 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 MORF4L1P4-201ENST00000450245 976 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 RN7SL610P-201ENST00000463845 291 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
RFX4Q33E94 STRADBP1-201ENST00000478954 1281 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 RPL23AP72-201ENST00000492447 435 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.91□□□□□ -1.78
RFX4Q33E94 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.91□□□□□ -1.78
RFX4Q33E94 SNORD116-26-201ENST00000516006 96 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 MIR2114-201ENST00000516645 80 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.91□□□□□ -1.78
RFX4Q33E94 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.91□□□□□ -1.78
RFX4Q33E94 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.91□□□□□ -1.78
RFX4Q33E94 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.91□□□□□ -1.78
RFX4Q33E94 AP001160.4-201ENST00000596971 382 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 MRPS35P3-201ENST00000603189 709 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 AC104662.1-201ENST00000604448 511 ntBASIC3.91□□□□□ -1.78
RFX4Q33E94 AL049539.1-201ENST00000611964 459 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms