Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HSPG2P98160 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HSPG2P98160 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HSPG2P98160 AC007823.1-201ENST00000569932 1566 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
HSPG2P98160 RNA5SP175-201ENST00000364275 119 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 RPL7P60-201ENST00000397636 735 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC2.39□□□□□ -2.03
HSPG2P98160 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC2.39□□□□□ -2.03
HSPG2P98160 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.39□□□□□ -2.03
HSPG2P98160 OOSP1P1-201ENST00000423265 274 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.39□□□□□ -2.03
HSPG2P98160 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.39□□□□□ -2.03
HSPG2P98160 MTND6P32-201ENST00000457611 483 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 AC090013.1-201ENST00000485147 480 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 RN7SL504P-201ENST00000494496 287 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 RPL29P14-201ENST00000495837 428 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
HSPG2P98160 RNA5SP446-201ENST00000515955 82 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC2.39□□□□□ -2.03
HSPG2P98160 AC025627.2-201ENST00000576220 160 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 SNX6P1-201ENST00000601728 1224 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
HSPG2P98160 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HSPG2P98160 AC005831.1-201ENST00000624384 1697 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
HSPG2P98160 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
HSPG2P98160 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HSPG2P98160 OR56B2P-201ENST00000317102 954 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.38□□□□□ -2.03
HSPG2P98160 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC2.38□□□□□ -2.03
HSPG2P98160 RPL21P110-201ENST00000433345 446 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC2.38□□□□□ -2.03
HSPG2P98160 IGKV2-38-201ENST00000517443 247 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 AC007998.5-201ENST00000622938 237 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HSPG2P98160 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HSPG2P98160 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HSPG2P98160 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HSPG2P98160 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HSPG2P98160 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HSPG2P98160 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HSPG2P98160 OR10J6P-201ENST00000289731 930 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HSPG2P98160 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HSPG2P98160 RNU11-201ENST00000387069 134 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
HSPG2P98160 BX119904.3-201ENST00000428194 957 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 AC139783.2-201ENST00000504847 1145 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 RNA5SP116-201ENST00000516132 98 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC2.38□□□□□ -2.03
HSPG2P98160 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.38□□□□□ -2.03
HSPG2P98160 AL360012.1-201ENST00000602813 131 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 AC091905.2-201ENST00000623143 306 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.38□□□□□ -2.03
HSPG2P98160 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
HSPG2P98160 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HSPG2P98160 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HSPG2P98160 HNRNPA1P54-201ENST00000411857 9714 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 SNORA71B-202ENST00000439232 272 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 VN1R25P-201ENST00000443385 738 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 VN1R32P-201ENST00000452234 905 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.38□□□□□ -2.03
HSPG2P98160 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC2.38□□□□□ -2.03
HSPG2P98160 AC090286.3-201ENST00000573133 187 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 AL391497.1-201ENST00000608671 547 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 AC010266.2-201ENST00000564741 3255 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HSPG2P98160 AL365440.1-201ENST00000436135 2167 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.38□□□□□ -2.03
HSPG2P98160 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
HSPG2P98160 AL161631.1-201ENST00000417933 486 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC2.38□□□□□ -2.03
HSPG2P98160 RPL26P28-201ENST00000451325 435 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.38□□□□□ -2.03
HSPG2P98160 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC2.38□□□□□ -2.03
HSPG2P98160 AC138409.2-202ENST00000507274 458 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 RNU6-237P-201ENST00000515985 71 ntBASIC2.38□□□□□ -2.03
HSPG2P98160 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC2.38□□□□□ -2.03
HSPG2P98160 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.38□□□□□ -2.03
HSPG2P98160 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC2.37□□□□□ -2.03
HSPG2P98160 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC2.37□□□□□ -2.03
HSPG2P98160 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HSPG2P98160 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
HSPG2P98160 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HSPG2P98160 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HSPG2P98160 AC022417.1-201ENST00000624768 1303 ntBASIC2.37□□□□□ -2.03
HSPG2P98160 AL078604.1-201ENST00000404609 466 ntBASIC2.37□□□□□ -2.03
HSPG2P98160 BX323014.1-201ENST00000412876 237 ntBASIC2.37□□□□□ -2.03
HSPG2P98160 AC107083.1-201ENST00000439643 279 ntBASIC2.37□□□□□ -2.03
HSPG2P98160 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HSPG2P98160 OR8I1P-201ENST00000529291 931 ntBASIC2.37□□□□□ -2.03
HSPG2P98160 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HSPG2P98160 AC006116.10-201ENST00000591836 581 ntBASIC2.37□□□□□ -2.03
HSPG2P98160 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC2.37□□□□□ -2.03
HSPG2P98160 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC2.37□□□□□ -2.03
HSPG2P98160 NAMPTP1-201ENST00000440465 2514 ntBASIC2.37□□□□□ -2.03
HSPG2P98160 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC2.37□□□□□ -2.03
HSPG2P98160 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms