Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 ZNF962P-201ENST00000443465 3140 ntBASIC3.71□□□□□ -1.82
ACTBP60709 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ACTBP60709 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ACTBP60709 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.71□□□□□ -1.82
ACTBP60709 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ACTBP60709 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
ACTBP60709 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.7□□□□□ -1.82
ACTBP60709 AC010928.1-201ENST00000592477 1447 ntBASIC3.7□□□□□ -1.82
ACTBP60709 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ACTBP60709 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ACTBP60709 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ACTBP60709 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.7□□□□□ -1.82
ACTBP60709 AC092162.3-201ENST00000624511 1624 ntBASIC3.7□□□□□ -1.82
ACTBP60709 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ACTBP60709 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
ACTBP60709 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ACTBP60709 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ACTBP60709 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
ACTBP60709 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.7□□□□□ -1.82
ACTBP60709 AC114814.2-201ENST00000419195 485 ntBASIC3.7□□□□□ -1.82
ACTBP60709 AC234779.1-201ENST00000425910 285 ntBASIC3.7□□□□□ -1.82
ACTBP60709 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.7□□□□□ -1.82
ACTBP60709 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.7□□□□□ -1.82
ACTBP60709 PPIAP17-201ENST00000438507 471 ntBASIC3.7□□□□□ -1.82
ACTBP60709 UBE2V1P3-201ENST00000439651 417 ntBASIC3.7□□□□□ -1.82
ACTBP60709 TPTE2P3-201ENST00000441562 1189 ntBASIC3.7□□□□□ -1.82
ACTBP60709 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.7□□□□□ -1.82
ACTBP60709 AL133477.1-201ENST00000457472 514 ntBASIC3.7□□□□□ -1.82
ACTBP60709 RPL35AP28-201ENST00000459730 331 ntBASIC3.7□□□□□ -1.82
ACTBP60709 RPS27AP17-201ENST00000463344 455 ntBASIC3.7□□□□□ -1.82
ACTBP60709 AC022336.1-201ENST00000475510 337 ntBASIC3.7□□□□□ -1.82
ACTBP60709 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.7□□□□□ -1.82
ACTBP60709 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.7□□□□□ -1.82
ACTBP60709 AC023050.1-201ENST00000498198 304 ntBASIC3.7□□□□□ -1.82
ACTBP60709 AC105233.1-201ENST00000498840 781 ntBASIC3.7□□□□□ -1.82
ACTBP60709 MTND4LP2-201ENST00000502312 285 ntBASIC3.7□□□□□ -1.82
ACTBP60709 AC010374.1-201ENST00000503762 1237 ntBASIC3.7□□□□□ -1.82
ACTBP60709 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.7□□□□□ -1.82
ACTBP60709 AL592156.1-201ENST00000508758 304 ntBASIC3.7□□□□□ -1.82
ACTBP60709 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.7□□□□□ -1.82
ACTBP60709 AGGF1P8-201ENST00000562979 1000 ntBASIC3.7□□□□□ -1.82
ACTBP60709 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ACTBP60709 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.7□□□□□ -1.82
ACTBP60709 AC009101.1-201ENST00000568135 242 ntBASIC3.7□□□□□ -1.82
ACTBP60709 MIR4270-201ENST00000581799 70 ntBASIC3.7□□□□□ -1.82
ACTBP60709 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.7□□□□□ -1.82
ACTBP60709 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.7□□□□□ -1.82
ACTBP60709 AL133338.2-201ENST00000604292 736 ntBASIC3.7□□□□□ -1.82
ACTBP60709 AC110741.2-201ENST00000605278 268 ntBASIC3.7□□□□□ -1.82
ACTBP60709 AC024940.4-201ENST00000605507 246 ntBASIC3.7□□□□□ -1.82
ACTBP60709 SNORA35B-201ENST00000607417 129 ntBASIC3.7□□□□□ -1.82
ACTBP60709 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.7□□□□□ -1.82
ACTBP60709 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
ACTBP60709 AC083899.2-201ENST00000423285 1376 ntBASIC3.7□□□□□ -1.82
ACTBP60709 AC096656.1-201ENST00000623826 1364 ntBASIC3.7□□□□□ -1.82
ACTBP60709 SPATA2P1-201ENST00000431223 2055 ntBASIC3.7□□□□□ -1.82
ACTBP60709 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
ACTBP60709 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
ACTBP60709 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.7□□□□□ -1.82
ACTBP60709 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
ACTBP60709 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ACTBP60709 NOL8P1-201ENST00000508336 3529 ntBASIC3.7□□□□□ -1.82
ACTBP60709 AL627171.1-201ENST00000618845 1308 ntBASIC3.7□□□□□ -1.82
ACTBP60709 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
ACTBP60709 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ACTBP60709 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ACTBP60709 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ACTBP60709 RNA5SP167-201ENST00000365461 116 ntBASIC3.69□□□□□ -1.82
ACTBP60709 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ACTBP60709 SNORA3C-201ENST00000408792 125 ntBASIC3.69□□□□□ -1.82
ACTBP60709 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.69□□□□□ -1.82
ACTBP60709 AMD1P2-201ENST00000412936 992 ntBASIC3.69□□□□□ -1.82
ACTBP60709 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.69□□□□□ -1.82
ACTBP60709 EIF1P3-201ENST00000423841 334 ntBASIC3.69□□□□□ -1.82
ACTBP60709 NPM1P26-201ENST00000426339 738 ntBASIC3.69□□□□□ -1.82
ACTBP60709 AC017083.1-201ENST00000428093 483 ntBASIC3.69□□□□□ -1.82
ACTBP60709 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.69□□□□□ -1.82
ACTBP60709 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.69□□□□□ -1.82
ACTBP60709 RPL23AP93-201ENST00000440847 484 ntBASIC3.69□□□□□ -1.82
ACTBP60709 AC114495.1-201ENST00000441274 436 ntBASIC3.69□□□□□ -1.82
ACTBP60709 RPL23AP43-201ENST00000446445 471 ntBASIC3.69□□□□□ -1.82
ACTBP60709 MTND2P25-201ENST00000449028 610 ntBASIC3.69□□□□□ -1.82
ACTBP60709 AC005229.2-201ENST00000456995 399 ntBASIC3.69□□□□□ -1.82
ACTBP60709 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.69□□□□□ -1.82
ACTBP60709 SNORD108-201ENST00000459332 71 ntBASIC3.69□□□□□ -1.82
ACTBP60709 RPS27AP16-201ENST00000492222 470 ntBASIC3.69□□□□□ -1.82
ACTBP60709 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.69□□□□□ -1.82
ACTBP60709 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.69□□□□□ -1.82
ACTBP60709 RNU6-319P-201ENST00000516025 108 ntBASIC3.69□□□□□ -1.82
ACTBP60709 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.69□□□□□ -1.82
ACTBP60709 AL360157.1-201ENST00000565962 87 ntBASIC3.69□□□□□ -1.82
ACTBP60709 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.69□□□□□ -1.82
ACTBP60709 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.69□□□□□ -1.82
ACTBP60709 AC073091.2-201ENST00000603205 907 ntBASIC3.69□□□□□ -1.82
ACTBP60709 AC116651.1-201ENST00000609724 556 ntBASIC3.69□□□□□ -1.82
ACTBP60709 AC099669.2-201ENST00000616549 437 ntBASIC3.69□□□□□ -1.82
ACTBP60709 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.69□□□□□ -1.82
ACTBP60709 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ACTBP60709 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
ACTBP60709 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms