Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 HMGB3P19-201ENST00000403971 560 ntBASIC5.27□□□□□ -1.57
RIPK4P57078 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.27□□□□□ -1.57
RIPK4P57078 NANOGP6-201ENST00000429190 847 ntBASIC5.27□□□□□ -1.57
RIPK4P57078 VDAC1P6-201ENST00000430062 855 ntBASIC5.27□□□□□ -1.57
RIPK4P57078 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.27□□□□□ -1.57
RIPK4P57078 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.27□□□□□ -1.57
RIPK4P57078 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.27□□□□□ -1.57
RIPK4P57078 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.27□□□□□ -1.57
RIPK4P57078 AL121877.1-201ENST00000453704 622 ntBASIC5.27□□□□□ -1.57
RIPK4P57078 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.27□□□□□ -1.57
RIPK4P57078 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.27□□□□□ -1.57
RIPK4P57078 AC026402.1-201ENST00000513642 170 ntBASIC5.27□□□□□ -1.57
RIPK4P57078 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.27□□□□□ -1.57
RIPK4P57078 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.27□□□□□ -1.57
RIPK4P57078 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.27□□□□□ -1.57
RIPK4P57078 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
RIPK4P57078 AGGF1P6-201ENST00000569213 976 ntBASIC5.27□□□□□ -1.57
RIPK4P57078 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.27□□□□□ -1.57
RIPK4P57078 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.27□□□□□ -1.57
RIPK4P57078 MIR6500-201ENST00000622700 86 ntBASIC5.27□□□□□ -1.57
RIPK4P57078 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RIPK4P57078 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.27□□□□□ -1.57
RIPK4P57078 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RIPK4P57078 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RIPK4P57078 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RIPK4P57078 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RIPK4P57078 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RIPK4P57078 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.26□□□□□ -1.57
RIPK4P57078 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RIPK4P57078 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RIPK4P57078 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RIPK4P57078 RN7SKP224-201ENST00000364140 325 ntBASIC5.26□□□□□ -1.57
RIPK4P57078 RN7SKP280-201ENST00000364196 304 ntBASIC5.26□□□□□ -1.57
RIPK4P57078 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.26□□□□□ -1.57
RIPK4P57078 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RIPK4P57078 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.26□□□□□ -1.57
RIPK4P57078 PTMAP3-201ENST00000447474 330 ntBASIC5.26□□□□□ -1.57
RIPK4P57078 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.26□□□□□ -1.57
RIPK4P57078 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.26□□□□□ -1.57
RIPK4P57078 AC022968.1-201ENST00000567372 442 ntBASIC5.26□□□□□ -1.57
RIPK4P57078 OR1AB1P-201ENST00000585564 761 ntBASIC5.26□□□□□ -1.57
RIPK4P57078 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.26□□□□□ -1.57
RIPK4P57078 AC104662.1-201ENST00000604448 511 ntBASIC5.26□□□□□ -1.57
RIPK4P57078 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RIPK4P57078 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RIPK4P57078 HSPD1P11-201ENST00000508643 1702 ntBASIC5.26□□□□□ -1.57
RIPK4P57078 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.25□□□□□ -1.57
RIPK4P57078 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.25□□□□□ -1.57
RIPK4P57078 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RIPK4P57078 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RIPK4P57078 RNA5SP399-201ENST00000364003 117 ntBASIC5.25□□□□□ -1.57
RIPK4P57078 AL050305.1-201ENST00000399993 1230 ntBASIC5.25□□□□□ -1.57
RIPK4P57078 MTCO1P54-201ENST00000430139 712 ntBASIC5.25□□□□□ -1.57
RIPK4P57078 FABP3P2-201ENST00000453169 399 ntBASIC5.25□□□□□ -1.57
RIPK4P57078 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.25□□□□□ -1.57
RIPK4P57078 AC020898.1-201ENST00000474167 787 ntBASIC5.25□□□□□ -1.57
RIPK4P57078 AC110792.1-201ENST00000491826 472 ntBASIC5.25□□□□□ -1.57
RIPK4P57078 AC025445.1-201ENST00000502728 300 ntBASIC5.25□□□□□ -1.57
RIPK4P57078 AC139783.2-201ENST00000504847 1145 ntBASIC5.25□□□□□ -1.57
RIPK4P57078 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.25□□□□□ -1.57
RIPK4P57078 RNA5SP179-201ENST00000517284 121 ntBASIC5.25□□□□□ -1.57
RIPK4P57078 IGKV2-38-201ENST00000517443 247 ntBASIC5.25□□□□□ -1.57
RIPK4P57078 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.25□□□□□ -1.57
RIPK4P57078 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.25□□□□□ -1.57
RIPK4P57078 AC091516.1-201ENST00000549191 703 ntBASIC5.25□□□□□ -1.57
RIPK4P57078 AC091167.4-201ENST00000605079 184 ntBASIC5.25□□□□□ -1.57
RIPK4P57078 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RIPK4P57078 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RIPK4P57078 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RIPK4P57078 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RIPK4P57078 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RIPK4P57078 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RIPK4P57078 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RIPK4P57078 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.24□□□□□ -1.57
RIPK4P57078 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RIPK4P57078 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RIPK4P57078 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.24□□□□□ -1.57
RIPK4P57078 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.24□□□□□ -1.57
RIPK4P57078 MTND2P11-201ENST00000423638 648 ntBASIC5.24□□□□□ -1.57
RIPK4P57078 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.24□□□□□ -1.57
RIPK4P57078 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.24□□□□□ -1.57
RIPK4P57078 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.24□□□□□ -1.57
RIPK4P57078 AC010460.1-201ENST00000507087 466 ntBASIC5.24□□□□□ -1.57
RIPK4P57078 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.24□□□□□ -1.57
RIPK4P57078 YPEL5P3-201ENST00000547227 352 ntBASIC5.24□□□□□ -1.57
RIPK4P57078 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.24□□□□□ -1.57
RIPK4P57078 RN7SL703P-201ENST00000578485 302 ntBASIC5.24□□□□□ -1.57
RIPK4P57078 AC053481.4-201ENST00000583164 216 ntBASIC5.24□□□□□ -1.57
RIPK4P57078 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.24□□□□□ -1.57
RIPK4P57078 AL606490.9-201ENST00000603331 271 ntBASIC5.24□□□□□ -1.57
RIPK4P57078 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.24□□□□□ -1.57
RIPK4P57078 AL773545.4-201ENST00000637262 310 ntBASIC5.24□□□□□ -1.57
RIPK4P57078 AL513478.4-201ENST00000641636 310 ntBASIC5.24□□□□□ -1.57
RIPK4P57078 AC087190.4-201ENST00000574616 8334 ntBASIC5.24□□□□□ -1.57
RIPK4P57078 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RIPK4P57078 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RIPK4P57078 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.24□□□□□ -1.57
RIPK4P57078 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RIPK4P57078 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RIPK4P57078 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms