Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
CMC4P56277 AC008033.1-201ENST00000216407 1162 ntBASIC3.21□□□□□ -1.9
CMC4P56277 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CMC4P56277 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CMC4P56277 IL6STP1-201ENST00000346911 1020 ntBASIC3.21□□□□□ -1.9
CMC4P56277 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.21□□□□□ -1.9
CMC4P56277 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CMC4P56277 RNA5SP366-201ENST00000365454 123 ntBASIC3.21□□□□□ -1.9
CMC4P56277 SNORA62-201ENST00000365493 153 ntBASIC3.21□□□□□ -1.9
CMC4P56277 RNU6-185P-201ENST00000384421 107 ntBASIC3.21□□□□□ -1.9
CMC4P56277 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CMC4P56277 AL589655.1-201ENST00000405398 482 ntBASIC3.21□□□□□ -1.9
CMC4P56277 MIR1911-201ENST00000410783 80 ntBASIC3.21□□□□□ -1.9
CMC4P56277 AC013404.1-201ENST00000413068 249 ntBASIC3.21□□□□□ -1.9
CMC4P56277 RANP4-201ENST00000413361 655 ntBASIC3.21□□□□□ -1.9
CMC4P56277 AC108032.1-201ENST00000416706 207 ntBASIC3.21□□□□□ -1.9
CMC4P56277 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.21□□□□□ -1.9
CMC4P56277 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC3.21□□□□□ -1.9
CMC4P56277 RPL18P10-201ENST00000425606 538 ntBASIC3.21□□□□□ -1.9
CMC4P56277 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.21□□□□□ -1.9
CMC4P56277 AL160175.1-201ENST00000428124 247 ntBASIC3.21□□□□□ -1.9
CMC4P56277 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.21□□□□□ -1.9
CMC4P56277 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.21□□□□□ -1.9
CMC4P56277 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.21□□□□□ -1.9
CMC4P56277 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.21□□□□□ -1.9
CMC4P56277 CBX1P1-201ENST00000440184 427 ntBASIC3.21□□□□□ -1.9
CMC4P56277 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.21□□□□□ -1.9
CMC4P56277 H2AFZP6-201ENST00000444403 394 ntBASIC3.21□□□□□ -1.9
CMC4P56277 ABCF2P2-201ENST00000450549 296 ntBASIC3.21□□□□□ -1.9
CMC4P56277 PPIAP21-201ENST00000464473 501 ntBASIC3.21□□□□□ -1.9
CMC4P56277 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CMC4P56277 PGBD4P4-201ENST00000509673 613 ntBASIC3.21□□□□□ -1.9
CMC4P56277 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.21□□□□□ -1.9
CMC4P56277 RNU6-889P-201ENST00000517189 103 ntBASIC3.21□□□□□ -1.9
CMC4P56277 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.21□□□□□ -1.9
CMC4P56277 HIGD1AP18-201ENST00000520730 278 ntBASIC3.21□□□□□ -1.9
CMC4P56277 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.21□□□□□ -1.9
CMC4P56277 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.21□□□□□ -1.9
CMC4P56277 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.21□□□□□ -1.9
CMC4P56277 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.21□□□□□ -1.9
CMC4P56277 AC006064.5-201ENST00000541782 248 ntBASIC3.21□□□□□ -1.9
CMC4P56277 AL109766.1-201ENST00000555080 552 ntBASIC3.21□□□□□ -1.9
CMC4P56277 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.21□□□□□ -1.9
CMC4P56277 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.21□□□□□ -1.9
CMC4P56277 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.21□□□□□ -1.9
CMC4P56277 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.21□□□□□ -1.9
CMC4P56277 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.21□□□□□ -1.9
CMC4P56277 AC005229.3-201ENST00000603438 323 ntBASIC3.21□□□□□ -1.9
CMC4P56277 AC242628.1-201ENST00000606810 391 ntBASIC3.21□□□□□ -1.9
CMC4P56277 AL391834.1-201ENST00000609609 560 ntBASIC3.21□□□□□ -1.9
CMC4P56277 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CMC4P56277 AL353726.1-201ENST00000614041 1000 ntBASIC3.21□□□□□ -1.9
CMC4P56277 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.21□□□□□ -1.9
CMC4P56277 AL139254.3-201ENST00000641097 674 ntBASIC3.21□□□□□ -1.9
CMC4P56277 AC092162.3-201ENST00000624511 1624 ntBASIC3.21□□□□□ -1.9
CMC4P56277 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC3.21□□□□□ -1.9
CMC4P56277 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.21□□□□□ -1.9
CMC4P56277 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.21□□□□□ -1.9
CMC4P56277 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CMC4P56277 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CMC4P56277 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.21□□□□□ -1.9
CMC4P56277 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CMC4P56277 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.21□□□□□ -1.9
CMC4P56277 AC105074.1-201ENST00000623380 3095 ntBASIC3.21□□□□□ -1.9
CMC4P56277 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CMC4P56277 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.2□□□□□ -1.9
CMC4P56277 CCT8P1-201ENST00000413611 1657 ntBASIC3.2□□□□□ -1.9
CMC4P56277 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CMC4P56277 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.2□□□□□ -1.9
CMC4P56277 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CMC4P56277 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.2□□□□□ -1.9
CMC4P56277 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CMC4P56277 AC114546.3-201ENST00000623582 1734 ntBASIC3.2□□□□□ -1.9
CMC4P56277 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CMC4P56277 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CMC4P56277 AC019155.1-201ENST00000382242 574 ntBASIC3.2□□□□□ -1.9
CMC4P56277 MIR92A2-201ENST00000385299 75 ntBASIC3.2□□□□□ -1.9
CMC4P56277 SNORD96B-201ENST00000386148 79 ntBASIC3.2□□□□□ -1.9
CMC4P56277 RN7SKP182-201ENST00000410772 298 ntBASIC3.2□□□□□ -1.9
CMC4P56277 RN7SKP97-201ENST00000410966 333 ntBASIC3.2□□□□□ -1.9
CMC4P56277 AL358176.3-201ENST00000420757 454 ntBASIC3.2□□□□□ -1.9
CMC4P56277 RPL23AP38-201ENST00000423801 469 ntBASIC3.2□□□□□ -1.9
CMC4P56277 AL157831.1-201ENST00000426134 473 ntBASIC3.2□□□□□ -1.9
CMC4P56277 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.2□□□□□ -1.9
CMC4P56277 MTCO1P52-201ENST00000433928 531 ntBASIC3.2□□□□□ -1.9
CMC4P56277 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.2□□□□□ -1.9
CMC4P56277 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.2□□□□□ -1.9
CMC4P56277 RPL7P22-201ENST00000466005 733 ntBASIC3.2□□□□□ -1.9
CMC4P56277 RPS23P7-201ENST00000466210 444 ntBASIC3.2□□□□□ -1.9
CMC4P56277 RPL23AP12-201ENST00000467573 473 ntBASIC3.2□□□□□ -1.9
CMC4P56277 UQCRHP4-201ENST00000471686 272 ntBASIC3.2□□□□□ -1.9
CMC4P56277 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.2□□□□□ -1.9
CMC4P56277 AC006499.6-201ENST00000511169 607 ntBASIC3.2□□□□□ -1.9
CMC4P56277 AC021146.3-201ENST00000511911 260 ntBASIC3.2□□□□□ -1.9
CMC4P56277 C1GALT1P3-201ENST00000522049 819 ntBASIC3.2□□□□□ -1.9
CMC4P56277 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.2□□□□□ -1.9
CMC4P56277 AC068993.1-201ENST00000546724 589 ntBASIC3.2□□□□□ -1.9
CMC4P56277 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.2□□□□□ -1.9
CMC4P56277 AC068446.3-201ENST00000555285 382 ntBASIC3.2□□□□□ -1.9
CMC4P56277 TVP23BP1-201ENST00000557500 617 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms