Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.78□□□□□ -1.64
VCPP55072 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.78□□□□□ -1.64
VCPP55072 CRYBB2P1-203ENST00000415709 538 ntBASIC4.78□□□□□ -1.64
VCPP55072 IPMKP1-201ENST00000425988 855 ntBASIC4.78□□□□□ -1.64
VCPP55072 RPL21P91-201ENST00000429231 479 ntBASIC4.78□□□□□ -1.64
VCPP55072 RPS3AP54-201ENST00000435535 734 ntBASIC4.78□□□□□ -1.64
VCPP55072 RPL12P46-201ENST00000436610 195 ntBASIC4.78□□□□□ -1.64
VCPP55072 AC005008.1-201ENST00000456151 612 ntBASIC4.78□□□□□ -1.64
VCPP55072 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.78□□□□□ -1.64
VCPP55072 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.78□□□□□ -1.64
VCPP55072 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.78□□□□□ -1.64
VCPP55072 AC098799.3-201ENST00000506095 438 ntBASIC4.78□□□□□ -1.64
VCPP55072 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.78□□□□□ -1.64
VCPP55072 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.78□□□□□ -1.64
VCPP55072 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.78□□□□□ -1.64
VCPP55072 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
VCPP55072 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.78□□□□□ -1.64
VCPP55072 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
VCPP55072 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.78□□□□□ -1.64
VCPP55072 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.78□□□□□ -1.64
VCPP55072 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.78□□□□□ -1.64
VCPP55072 AC027455.1-201ENST00000574104 594 ntBASIC4.78□□□□□ -1.64
VCPP55072 MIR4298-201ENST00000584380 73 ntBASIC4.78□□□□□ -1.64
VCPP55072 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.78□□□□□ -1.64
VCPP55072 AC084373.1-201ENST00000603311 235 ntBASIC4.78□□□□□ -1.64
VCPP55072 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.78□□□□□ -1.64
VCPP55072 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.78□□□□□ -1.64
VCPP55072 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VCPP55072 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VCPP55072 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.78□□□□□ -1.64
VCPP55072 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VCPP55072 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VCPP55072 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
VCPP55072 AC006971.1-201ENST00000407916 4486 ntBASIC4.78□□□□□ -1.65
VCPP55072 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.78□□□□□ -1.65
VCPP55072 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.77□□□□□ -1.65
VCPP55072 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
VCPP55072 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VCPP55072 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.77□□□□□ -1.65
VCPP55072 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VCPP55072 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VCPP55072 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VCPP55072 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.77□□□□□ -1.65
VCPP55072 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VCPP55072 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VCPP55072 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
VCPP55072 OR10J6P-201ENST00000289731 930 ntBASIC4.77□□□□□ -1.65
VCPP55072 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VCPP55072 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
VCPP55072 RNA5SP151-201ENST00000365632 117 ntBASIC4.77□□□□□ -1.65
VCPP55072 AL590806.1-201ENST00000415818 853 ntBASIC4.77□□□□□ -1.65
VCPP55072 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.77□□□□□ -1.65
VCPP55072 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VCPP55072 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.77□□□□□ -1.65
VCPP55072 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VCPP55072 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.77□□□□□ -1.65
VCPP55072 RPL23AP93-201ENST00000440847 484 ntBASIC4.77□□□□□ -1.65
VCPP55072 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.77□□□□□ -1.65
VCPP55072 RPL5P30-201ENST00000465511 891 ntBASIC4.77□□□□□ -1.65
VCPP55072 RPS27AP16-201ENST00000492222 470 ntBASIC4.77□□□□□ -1.65
VCPP55072 RN7SL810P-201ENST00000493031 276 ntBASIC4.77□□□□□ -1.65
VCPP55072 AC108022.1-201ENST00000493466 478 ntBASIC4.77□□□□□ -1.65
VCPP55072 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.77□□□□□ -1.65
VCPP55072 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.77□□□□□ -1.65
VCPP55072 AC117525.1-201ENST00000515228 503 ntBASIC4.77□□□□□ -1.65
VCPP55072 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VCPP55072 AC067805.1-201ENST00000559344 470 ntBASIC4.77□□□□□ -1.65
VCPP55072 AC068714.1-201ENST00000559623 800 ntBASIC4.77□□□□□ -1.65
VCPP55072 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.77□□□□□ -1.65
VCPP55072 AC091178.1-203ENST00000584586 279 ntBASIC4.77□□□□□ -1.65
VCPP55072 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VCPP55072 SLC25A36P1-201ENST00000590111 465 ntBASIC4.77□□□□□ -1.65
VCPP55072 AF131215.7-201ENST00000602443 707 ntBASIC4.77□□□□□ -1.65
VCPP55072 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.77□□□□□ -1.65
VCPP55072 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.77□□□□□ -1.65
VCPP55072 AC116447.1-201ENST00000613153 453 ntBASIC4.77□□□□□ -1.65
VCPP55072 AC145207.9-201ENST00000623802 325 ntBASIC4.77□□□□□ -1.65
VCPP55072 MIR3653-201ENST00000625572 110 ntBASIC4.77□□□□□ -1.65
VCPP55072 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.77□□□□□ -1.65
VCPP55072 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.77□□□□□ -1.65
VCPP55072 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VCPP55072 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.77□□□□□ -1.65
VCPP55072 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.77□□□□□ -1.65
VCPP55072 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VCPP55072 AC005261.4-201ENST00000600047 1385 ntBASIC4.77□□□□□ -1.65
VCPP55072 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VCPP55072 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VCPP55072 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.77□□□□□ -1.65
VCPP55072 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VCPP55072 AL391684.1-202ENST00000641293 1636 ntBASIC4.76□□□□□ -1.65
VCPP55072 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.76□□□□□ -1.65
VCPP55072 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.76□□□□□ -1.65
VCPP55072 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
VCPP55072 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VCPP55072 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VCPP55072 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VCPP55072 RNU6-1251P-201ENST00000364502 107 ntBASIC4.76□□□□□ -1.65
VCPP55072 RNU6-225P-201ENST00000384613 103 ntBASIC4.76□□□□□ -1.65
VCPP55072 NPM1P10-201ENST00000398310 865 ntBASIC4.76□□□□□ -1.65
VCPP55072 RNA5SP146-201ENST00000410743 123 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms