Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EPHB3P54753 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EPHB3P54753 AP000432.2-201ENST00000624164 2048 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EPHB3P54753 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EPHB3P54753 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EPHB3P54753 AL161912.4-201ENST00000623889 2468 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EPHB3P54753 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EPHB3P54753 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.87□□□□□ -1.47
EPHB3P54753 MIR223-201ENST00000385204 110 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 RNA5SP91-201ENST00000390902 119 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.87□□□□□ -1.47
EPHB3P54753 SPTLC1P2-201ENST00000407089 121 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 RPL35AP24-201ENST00000413846 330 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EPHB3P54753 AC009237.5-201ENST00000414271 501 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.87□□□□□ -1.47
EPHB3P54753 SLC35E1P1-201ENST00000419313 864 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 MTCO1P3-201ENST00000429327 192 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.87□□□□□ -1.47
EPHB3P54753 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.87□□□□□ -1.47
EPHB3P54753 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.87□□□□□ -1.47
EPHB3P54753 RPL7P36-201ENST00000444633 681 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 AC092989.1-201ENST00000481235 277 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 AL358832.1-201ENST00000497800 389 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.87□□□□□ -1.47
EPHB3P54753 AC024558.1-201ENST00000505008 528 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 AC006499.3-201ENST00000506077 748 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 STMN1P2-201ENST00000508435 439 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 AC022483.1-201ENST00000514020 567 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 RNA5SP92-201ENST00000516437 110 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.87□□□□□ -1.47
EPHB3P54753 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.87□□□□□ -1.47
EPHB3P54753 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.87□□□□□ -1.47
EPHB3P54753 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.87□□□□□ -1.47
EPHB3P54753 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.87□□□□□ -1.47
EPHB3P54753 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.87□□□□□ -1.47
EPHB3P54753 BPTFP1-201ENST00000579209 492 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.87□□□□□ -1.47
EPHB3P54753 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.87□□□□□ -1.47
EPHB3P54753 MTCO2P22-201ENST00000603246 681 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 AP001836.1-201ENST00000604675 523 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 AP002505.2-201ENST00000623585 696 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
EPHB3P54753 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EPHB3P54753 VN2R3P-201ENST00000422626 1412 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 CASC19-206ENST00000641028 1430 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 AC017104.4-201ENST00000636283 1592 ntBASIC5.87□□□□□ -1.47
EPHB3P54753 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EPHB3P54753 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EPHB3P54753 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EPHB3P54753 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EPHB3P54753 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
EPHB3P54753 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.87□□□□□ -1.47
EPHB3P54753 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
EPHB3P54753 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
EPHB3P54753 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.86□□□□□ -1.47
EPHB3P54753 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.86□□□□□ -1.47
EPHB3P54753 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
EPHB3P54753 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
EPHB3P54753 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
EPHB3P54753 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
EPHB3P54753 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.86□□□□□ -1.47
EPHB3P54753 MT-RNR2-201ENST00000387347 1559 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
EPHB3P54753 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.86□□□□□ -1.47
EPHB3P54753 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
EPHB3P54753 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 SNORA74A-201ENST00000364089 198 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 RNU6-621P-201ENST00000364752 109 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.86□□□□□ -1.47
EPHB3P54753 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
EPHB3P54753 RNU5A-6P-201ENST00000384136 116 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 Y_RNA.450-201ENST00000384198 113 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 RNU1-77P-201ENST00000390868 162 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 RNU6-1009P-201ENST00000390996 107 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 AL009179.1-201ENST00000406085 265 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 RN7SKP56-201ENST00000410513 331 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 RNA5SP251-201ENST00000410614 137 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 AC019050.1-201ENST00000418508 492 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.86□□□□□ -1.47
EPHB3P54753 ATP5HP2-201ENST00000433885 485 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 AL138787.1-202ENST00000437804 898 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 AC092170.1-201ENST00000440211 356 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 AC002542.1-201ENST00000440683 193 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.86□□□□□ -1.47
EPHB3P54753 ARL5AP2-201ENST00000444698 533 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 AL157827.1-201ENST00000447622 132 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 AC079776.3-201ENST00000450665 370 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.86□□□□□ -1.47
EPHB3P54753 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.86□□□□□ -1.47
EPHB3P54753 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.86□□□□□ -1.47
EPHB3P54753 RN7SL172P-201ENST00000460535 303 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 RN7SL515P-201ENST00000463999 297 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 AC146507.1-201ENST00000468335 354 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 MTND6P6-201ENST00000478031 263 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.86□□□□□ -1.47
EPHB3P54753 RPS4XP1-201ENST00000482189 787 ntBASIC5.86□□□□□ -1.47
EPHB3P54753 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms