Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC004980.4-201ENST00000513375 203 ntBASIC5.23□□□□□ -1.57
COPB1P53618 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.23□□□□□ -1.57
COPB1P53618 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.23□□□□□ -1.57
COPB1P53618 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.23□□□□□ -1.57
COPB1P53618 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.23□□□□□ -1.57
COPB1P53618 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.23□□□□□ -1.57
COPB1P53618 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.23□□□□□ -1.57
COPB1P53618 AL109741.3-201ENST00000561748 592 ntBASIC5.23□□□□□ -1.57
COPB1P53618 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.23□□□□□ -1.57
COPB1P53618 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.23□□□□□ -1.57
COPB1P53618 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.23□□□□□ -1.57
COPB1P53618 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.23□□□□□ -1.57
COPB1P53618 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.23□□□□□ -1.57
COPB1P53618 MTND3P19-201ENST00000603825 345 ntBASIC5.23□□□□□ -1.57
COPB1P53618 AL451049.1-201ENST00000608672 497 ntBASIC5.23□□□□□ -1.57
COPB1P53618 AC013468.1-201ENST00000608680 598 ntBASIC5.23□□□□□ -1.57
COPB1P53618 AC073569.3-201ENST00000619055 682 ntBASIC5.23□□□□□ -1.57
COPB1P53618 AL359757.1-201ENST00000623176 255 ntBASIC5.23□□□□□ -1.57
COPB1P53618 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.23□□□□□ -1.57
COPB1P53618 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.23□□□□□ -1.57
COPB1P53618 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
COPB1P53618 LINC01808-202ENST00000641680 1116 ntBASIC5.23□□□□□ -1.57
COPB1P53618 NEAT1-202ENST00000501122 22743 ntBASIC5.23□□□□□ -1.57
COPB1P53618 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COPB1P53618 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
COPB1P53618 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COPB1P53618 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
COPB1P53618 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COPB1P53618 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COPB1P53618 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COPB1P53618 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
COPB1P53618 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.23□□□□□ -1.57
COPB1P53618 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COPB1P53618 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COPB1P53618 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COPB1P53618 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COPB1P53618 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COPB1P53618 AC099654.2-201ENST00000433031 1980 ntBASIC5.22□□□□□ -1.57
COPB1P53618 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COPB1P53618 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.22□□□□□ -1.57
COPB1P53618 AC131971.1-201ENST00000332881 1482 ntBASIC5.22□□□□□ -1.57
COPB1P53618 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.22□□□□□ -1.57
COPB1P53618 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COPB1P53618 Y_RNA.578-201ENST00000390903 88 ntBASIC5.22□□□□□ -1.57
COPB1P53618 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.22□□□□□ -1.57
COPB1P53618 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.22□□□□□ -1.57
COPB1P53618 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.22□□□□□ -1.57
COPB1P53618 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.22□□□□□ -1.57
COPB1P53618 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.22□□□□□ -1.57
COPB1P53618 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.22□□□□□ -1.57
COPB1P53618 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.22□□□□□ -1.57
COPB1P53618 AC097499.1-201ENST00000444277 208 ntBASIC5.22□□□□□ -1.57
COPB1P53618 HMGB3P6-201ENST00000444896 598 ntBASIC5.22□□□□□ -1.57
COPB1P53618 AC239798.3-201ENST00000454459 408 ntBASIC5.22□□□□□ -1.57
COPB1P53618 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.22□□□□□ -1.57
COPB1P53618 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.22□□□□□ -1.57
COPB1P53618 RPL7P32-201ENST00000457119 744 ntBASIC5.22□□□□□ -1.57
COPB1P53618 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
COPB1P53618 AC098583.1-201ENST00000480875 255 ntBASIC5.22□□□□□ -1.57
COPB1P53618 AC119751.1-201ENST00000513357 765 ntBASIC5.22□□□□□ -1.57
COPB1P53618 IGHV3-63-201ENST00000518422 341 ntBASIC5.22□□□□□ -1.57
COPB1P53618 HIGD1AP18-201ENST00000520730 278 ntBASIC5.22□□□□□ -1.57
COPB1P53618 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.22□□□□□ -1.57
COPB1P53618 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.22□□□□□ -1.57
COPB1P53618 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.22□□□□□ -1.57
COPB1P53618 AL442163.2-201ENST00000553912 710 ntBASIC5.22□□□□□ -1.57
COPB1P53618 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.22□□□□□ -1.57
COPB1P53618 AC023813.2-201ENST00000564321 469 ntBASIC5.22□□□□□ -1.57
COPB1P53618 AL390726.5-202ENST00000564800 256 ntBASIC5.22□□□□□ -1.57
COPB1P53618 AC015912.2-201ENST00000571053 181 ntBASIC5.22□□□□□ -1.57
COPB1P53618 MTND4LP24-201ENST00000572277 291 ntBASIC5.22□□□□□ -1.57
COPB1P53618 AC209154.1-201ENST00000582156 337 ntBASIC5.22□□□□□ -1.57
COPB1P53618 AC007349.4-201ENST00000608114 532 ntBASIC5.22□□□□□ -1.57
COPB1P53618 AC096586.1-201ENST00000610267 561 ntBASIC5.22□□□□□ -1.57
COPB1P53618 AC007497.1-201ENST00000610421 561 ntBASIC5.22□□□□□ -1.57
COPB1P53618 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COPB1P53618 VN2R3P-201ENST00000422626 1412 ntBASIC5.22□□□□□ -1.57
COPB1P53618 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COPB1P53618 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.22□□□□□ -1.57
COPB1P53618 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COPB1P53618 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
COPB1P53618 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
COPB1P53618 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
COPB1P53618 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
COPB1P53618 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
COPB1P53618 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
COPB1P53618 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
COPB1P53618 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COPB1P53618 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COPB1P53618 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
COPB1P53618 RNA5SP27-201ENST00000363839 119 ntBASIC5.21□□□□□ -1.58
COPB1P53618 RNU1-106P-201ENST00000384382 164 ntBASIC5.21□□□□□ -1.58
COPB1P53618 MIR765-201ENST00000390226 114 ntBASIC5.21□□□□□ -1.58
COPB1P53618 MIR550A3-201ENST00000390735 95 ntBASIC5.21□□□□□ -1.58
COPB1P53618 RPL23AP59-201ENST00000399415 461 ntBASIC5.21□□□□□ -1.58
COPB1P53618 RNU2-22P-201ENST00000411266 212 ntBASIC5.21□□□□□ -1.58
COPB1P53618 SETP15-201ENST00000412724 337 ntBASIC5.21□□□□□ -1.58
COPB1P53618 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.21□□□□□ -1.58
COPB1P53618 MTND2P18-201ENST00000419962 1030 ntBASIC5.21□□□□□ -1.58
COPB1P53618 OR2AM1P-201ENST00000422137 422 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms