Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.65□□□□□ -1.51
MSH6P52701 UBE2V2P4-201ENST00000447495 259 ntBASIC5.65□□□□□ -1.51
MSH6P52701 RPS29P2-201ENST00000479278 136 ntBASIC5.65□□□□□ -1.51
MSH6P52701 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.65□□□□□ -1.51
MSH6P52701 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.65□□□□□ -1.51
MSH6P52701 AC007991.1-201ENST00000522680 631 ntBASIC5.65□□□□□ -1.51
MSH6P52701 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.65□□□□□ -1.51
MSH6P52701 HMGN2P47-201ENST00000559378 272 ntBASIC5.65□□□□□ -1.51
MSH6P52701 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.65□□□□□ -1.51
MSH6P52701 HSPD1P14-201ENST00000432666 1618 ntBASIC5.65□□□□□ -1.51
MSH6P52701 AP001273.1-201ENST00000624493 3152 ntBASIC5.65□□□□□ -1.51
MSH6P52701 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MSH6P52701 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
MSH6P52701 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.64□□□□□ -1.51
MSH6P52701 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
MSH6P52701 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.64□□□□□ -1.51
MSH6P52701 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.64□□□□□ -1.51
MSH6P52701 AC104619.4-201ENST00000510773 249 ntBASIC5.64□□□□□ -1.51
MSH6P52701 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.64□□□□□ -1.51
MSH6P52701 GTF2IP8-201ENST00000560687 584 ntBASIC5.64□□□□□ -1.51
MSH6P52701 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.64□□□□□ -1.51
MSH6P52701 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.64□□□□□ -1.51
MSH6P52701 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.64□□□□□ -1.51
MSH6P52701 AC140113.4-201ENST00000622087 222 ntBASIC5.64□□□□□ -1.51
MSH6P52701 XKRY2-202ENST00000623874 1581 ntBASIC5.64□□□□□ -1.51
MSH6P52701 XKRY-202ENST00000624960 1581 ntBASIC5.64□□□□□ -1.51
MSH6P52701 MTND5P12-201ENST00000502851 1449 ntBASIC5.63□□□□□ -1.51
MSH6P52701 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MSH6P52701 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
MSH6P52701 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
MSH6P52701 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
MSH6P52701 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MSH6P52701 CBX1P3-201ENST00000413296 527 ntBASIC5.63□□□□□ -1.51
MSH6P52701 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.63□□□□□ -1.51
MSH6P52701 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MSH6P52701 OR4F13P-201ENST00000428478 931 ntBASIC5.63□□□□□ -1.51
MSH6P52701 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.63□□□□□ -1.51
MSH6P52701 RPL36AP13-201ENST00000457490 317 ntBASIC5.63□□□□□ -1.51
MSH6P52701 RPL6P9-201ENST00000466502 859 ntBASIC5.63□□□□□ -1.51
MSH6P52701 MIR3922-201ENST00000585192 84 ntBASIC5.63□□□□□ -1.51
MSH6P52701 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.63□□□□□ -1.51
MSH6P52701 MIMT1-201ENST00000597105 1050 ntBASIC5.63□□□□□ -1.51
MSH6P52701 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.63□□□□□ -1.51
MSH6P52701 AL353726.1-201ENST00000614041 1000 ntBASIC5.63□□□□□ -1.51
MSH6P52701 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.63□□□□□ -1.51
MSH6P52701 AC024023.1-201ENST00000624530 922 ntBASIC5.63□□□□□ -1.51
MSH6P52701 AC021242.1-201ENST00000507315 2035 ntBASIC5.63□□□□□ -1.51
MSH6P52701 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MSH6P52701 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MSH6P52701 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.63□□□□□ -1.51
MSH6P52701 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
MSH6P52701 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
MSH6P52701 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MSH6P52701 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MSH6P52701 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
MSH6P52701 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MSH6P52701 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.62□□□□□ -1.51
MSH6P52701 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MSH6P52701 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.62□□□□□ -1.51
MSH6P52701 MTND2P15-201ENST00000418575 892 ntBASIC5.62□□□□□ -1.51
MSH6P52701 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.62□□□□□ -1.51
MSH6P52701 RPL23AP65-201ENST00000475608 468 ntBASIC5.62□□□□□ -1.51
MSH6P52701 AC106707.2-201ENST00000484182 374 ntBASIC5.62□□□□□ -1.51
MSH6P52701 RPL29P14-201ENST00000495837 428 ntBASIC5.62□□□□□ -1.51
MSH6P52701 HMGN1P11-201ENST00000508668 303 ntBASIC5.62□□□□□ -1.51
MSH6P52701 BTG4P1-201ENST00000510421 183 ntBASIC5.62□□□□□ -1.51
MSH6P52701 LDHBP3-201ENST00000514909 822 ntBASIC5.62□□□□□ -1.51
MSH6P52701 AC091516.1-201ENST00000549191 703 ntBASIC5.62□□□□□ -1.51
MSH6P52701 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.62□□□□□ -1.51
MSH6P52701 AC023389.2-201ENST00000580031 955 ntBASIC5.62□□□□□ -1.51
MSH6P52701 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.62□□□□□ -1.51
MSH6P52701 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
MSH6P52701 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
MSH6P52701 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
MSH6P52701 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.62□□□□□ -1.51
MSH6P52701 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.61□□□□□ -1.51
MSH6P52701 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
MSH6P52701 PRO1804-201ENST00000623780 2050 ntBASIC5.61□□□□□ -1.51
MSH6P52701 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MSH6P52701 AC005261.2-201ENST00000593427 4258 ntBASIC5.61□□□□□ -1.51
MSH6P52701 AL031595.2-201ENST00000624215 19071 ntBASIC5.61□□□□□ -1.51
MSH6P52701 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
MSH6P52701 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
MSH6P52701 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.61□□□□□ -1.51
MSH6P52701 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.61□□□□□ -1.51
MSH6P52701 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
MSH6P52701 SNORD66.1-201ENST00000391230 76 ntBASIC5.61□□□□□ -1.51
MSH6P52701 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.61□□□□□ -1.51
MSH6P52701 CYCSP53-201ENST00000455540 265 ntBASIC5.61□□□□□ -1.51
MSH6P52701 AC090013.1-201ENST00000485147 480 ntBASIC5.61□□□□□ -1.51
MSH6P52701 DEFB109F-201ENST00000491870 277 ntBASIC5.61□□□□□ -1.51
MSH6P52701 BNIP3P41-201ENST00000503774 571 ntBASIC5.61□□□□□ -1.51
MSH6P52701 RN7SKP13-201ENST00000515933 244 ntBASIC5.61□□□□□ -1.51
MSH6P52701 AC090151.1-201ENST00000520784 730 ntBASIC5.61□□□□□ -1.51
MSH6P52701 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.61□□□□□ -1.51
MSH6P52701 CYCSP28-201ENST00000534284 321 ntBASIC5.61□□□□□ -1.51
MSH6P52701 AC016839.1-201ENST00000578162 867 ntBASIC5.61□□□□□ -1.51
MSH6P52701 AC090312.1-201ENST00000580637 348 ntBASIC5.61□□□□□ -1.51
MSH6P52701 MIR3124-201ENST00000582636 67 ntBASIC5.61□□□□□ -1.51
MSH6P52701 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms