Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.94□□□□□ -1.62
PTPN9P43378 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.94□□□□□ -1.62
PTPN9P43378 BX510359.2-201ENST00000417920 305 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 AL358176.3-201ENST00000420757 454 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 AC007394.1-201ENST00000421941 531 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 AP001324.1-201ENST00000428553 399 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 RPS24P8-201ENST00000431490 402 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 YWHAEP5-201ENST00000431545 765 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.94□□□□□ -1.62
PTPN9P43378 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.94□□□□□ -1.62
PTPN9P43378 LYPLA1P1-201ENST00000434514 622 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.94□□□□□ -1.62
PTPN9P43378 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.94□□□□□ -1.62
PTPN9P43378 ZNF886P-201ENST00000450781 723 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 AC079168.2-201ENST00000453977 416 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 AC092155.2-201ENST00000454675 477 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 RN7SL610P-201ENST00000463845 291 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 AL591473.1-201ENST00000464297 313 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.94□□□□□ -1.62
PTPN9P43378 AC008565.1-201ENST00000509046 885 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.94□□□□□ -1.62
PTPN9P43378 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.94□□□□□ -1.62
PTPN9P43378 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.94□□□□□ -1.62
PTPN9P43378 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.94□□□□□ -1.62
PTPN9P43378 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.94□□□□□ -1.62
PTPN9P43378 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.94□□□□□ -1.62
PTPN9P43378 BRD9P1-201ENST00000529855 560 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 AC124293.1-201ENST00000530034 493 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.94□□□□□ -1.62
PTPN9P43378 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.94□□□□□ -1.62
PTPN9P43378 AC018552.1-201ENST00000562099 811 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 MIR3934-201ENST00000579806 107 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 AC007448.1-201ENST00000582714 234 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 AC234772.3-201ENST00000602277 528 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.94□□□□□ -1.62
PTPN9P43378 AC068313.1-201ENST00000604028 1008 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 AC093424.1-201ENST00000604999 338 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.94□□□□□ -1.62
PTPN9P43378 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.94□□□□□ -1.62
PTPN9P43378 AP001005.3-201ENST00000622049 129 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 AC099786.3-201ENST00000565735 1410 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PTPN9P43378 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PTPN9P43378 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTPN9P43378 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTPN9P43378 AL031119.1-201ENST00000404707 1879 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTPN9P43378 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTPN9P43378 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.94□□□□□ -1.62
PTPN9P43378 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.94□□□□□ -1.62
PTPN9P43378 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
PTPN9P43378 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PTPN9P43378 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PTPN9P43378 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.93□□□□□ -1.62
PTPN9P43378 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PTPN9P43378 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTPN9P43378 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTPN9P43378 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
PTPN9P43378 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTPN9P43378 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PTPN9P43378 IGKV7-3-201ENST00000357453 298 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 RNU1-83P-201ENST00000363426 164 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PTPN9P43378 RNA5SP87-201ENST00000384155 118 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 AL359643.1-201ENST00000404109 423 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 HIGD1AP15-201ENST00000416198 280 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 AL449283.1-202ENST00000418249 604 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.93□□□□□ -1.62
PTPN9P43378 AC104837.2-201ENST00000427236 424 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.93□□□□□ -1.62
PTPN9P43378 RPL12P3-201ENST00000440080 396 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 AC073648.4-201ENST00000442655 781 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PTPN9P43378 Z73417.1-201ENST00000447373 778 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 AL139824.2-201ENST00000458731 1095 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 RN7SL826P-201ENST00000479724 288 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 METTL15P1-201ENST00000481421 1045 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 NIP7P2-201ENST00000485801 544 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PTPN9P43378 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PTPN9P43378 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.93□□□□□ -1.62
PTPN9P43378 HPRT1P2-201ENST00000505250 544 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 AC073358.1-201ENST00000505671 684 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 AC108471.1-201ENST00000513977 287 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.93□□□□□ -1.62
PTPN9P43378 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.93□□□□□ -1.62
PTPN9P43378 DEFB130C-202ENST00000530001 230 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 OR5D15P-201ENST00000531671 942 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.93□□□□□ -1.62
PTPN9P43378 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.93□□□□□ -1.62
PTPN9P43378 AC105129.1-201ENST00000560250 297 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.93□□□□□ -1.62
PTPN9P43378 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.93□□□□□ -1.62
PTPN9P43378 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.93□□□□□ -1.62
PTPN9P43378 AL035411.2-201ENST00000604022 421 ntBASIC4.93□□□□□ -1.62
PTPN9P43378 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.93□□□□□ -1.62
PTPN9P43378 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms