Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL8A1P27658 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.04□□□□□ -1.44
COL8A1P27658 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.04□□□□□ -1.44
COL8A1P27658 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.04□□□□□ -1.44
COL8A1P27658 RNU7-66P-201ENST00000459469 62 ntBASIC6.04□□□□□ -1.44
COL8A1P27658 AC099340.1-201ENST00000475247 599 ntBASIC6.04□□□□□ -1.44
COL8A1P27658 AC006539.1-201ENST00000481419 501 ntBASIC6.04□□□□□ -1.44
COL8A1P27658 RPSAP51-201ENST00000497462 645 ntBASIC6.04□□□□□ -1.44
COL8A1P27658 H3F3AP3-201ENST00000497682 407 ntBASIC6.04□□□□□ -1.44
COL8A1P27658 Y_RNA.661-201ENST00000516003 99 ntBASIC6.04□□□□□ -1.44
COL8A1P27658 Y_RNA.700-201ENST00000516806 100 ntBASIC6.04□□□□□ -1.44
COL8A1P27658 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.04□□□□□ -1.44
COL8A1P27658 AC027309.2-201ENST00000520566 192 ntBASIC6.04□□□□□ -1.44
COL8A1P27658 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC6.04□□□□□ -1.44
COL8A1P27658 MIR3942-201ENST00000585264 109 ntBASIC6.04□□□□□ -1.44
COL8A1P27658 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.04□□□□□ -1.44
COL8A1P27658 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.04□□□□□ -1.44
COL8A1P27658 AC015967.1-201ENST00000619893 476 ntBASIC6.04□□□□□ -1.44
COL8A1P27658 OR52H1-202ENST00000641796 1061 ntBASIC6.04□□□□□ -1.44
COL8A1P27658 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.04□□□□□ -1.44
COL8A1P27658 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC6.04□□□□□ -1.44
COL8A1P27658 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
COL8A1P27658 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.04□□□□□ -1.44
COL8A1P27658 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
COL8A1P27658 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL8A1P27658 AC105074.1-201ENST00000623380 3095 ntBASIC6.04□□□□□ -1.44
COL8A1P27658 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.04□□□□□ -1.44
COL8A1P27658 SALL1P1-201ENST00000438101 3837 ntBASIC6.04□□□□□ -1.44
COL8A1P27658 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL8A1P27658 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL8A1P27658 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL8A1P27658 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.04□□□□□ -1.44
COL8A1P27658 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.04□□□□□ -1.44
COL8A1P27658 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.03□□□□□ -1.44
COL8A1P27658 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.03□□□□□ -1.44
COL8A1P27658 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL8A1P27658 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL8A1P27658 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
COL8A1P27658 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL8A1P27658 AL158163.1-201ENST00000603915 1649 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL8A1P27658 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL8A1P27658 AC104966.1-201ENST00000467010 1464 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC6.03□□□□□ -1.44
COL8A1P27658 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL8A1P27658 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL8A1P27658 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
COL8A1P27658 OR2AH1P-202ENST00000641232 2744 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 DLEU2L-201ENST00000371086 3555 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.03□□□□□ -1.44
COL8A1P27658 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
COL8A1P27658 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL8A1P27658 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
COL8A1P27658 Y_RNA.46-201ENST00000362695 102 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 RNU6-522P-201ENST00000364497 107 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 RNA5SP240-201ENST00000365355 128 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 RNU6-432P-201ENST00000384196 109 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 RNU6-452P-201ENST00000384406 107 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 AL096800.1-201ENST00000405326 893 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 AL590806.1-201ENST00000415818 853 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL8A1P27658 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.03□□□□□ -1.44
COL8A1P27658 RPS3P2-201ENST00000421346 701 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 AC083862.1-201ENST00000427378 1242 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.03□□□□□ -1.44
COL8A1P27658 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL8A1P27658 AC013470.1-201ENST00000453438 462 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 RPL37P3-201ENST00000456825 293 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 NF1P3-201ENST00000457709 450 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
COL8A1P27658 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.03□□□□□ -1.44
COL8A1P27658 RN7SL654P-201ENST00000479178 292 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 AC025465.3-201ENST00000510570 311 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 RNU6-566P-201ENST00000516790 107 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 AC090572.1-201ENST00000519251 160 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 AC022360.1-201ENST00000521058 340 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 GNAI2P1-201ENST00000541815 315 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.03□□□□□ -1.44
COL8A1P27658 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
COL8A1P27658 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC6.03□□□□□ -1.44
COL8A1P27658 MIR4790-201ENST00000577799 79 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.03□□□□□ -1.44
COL8A1P27658 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.03□□□□□ -1.44
COL8A1P27658 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.03□□□□□ -1.44
COL8A1P27658 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.03□□□□□ -1.44
COL8A1P27658 AC068802.1-201ENST00000603420 732 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.03□□□□□ -1.44
COL8A1P27658 AC063962.1-201ENST00000608199 521 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 AC061999.1-201ENST00000624454 177 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 AC079776.5-201ENST00000641920 211 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL8A1P27658 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL8A1P27658 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL8A1P27658 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
COL8A1P27658 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL8A1P27658 VPS35P1-201ENST00000563400 1518 ntBASIC6.03□□□□□ -1.44
COL8A1P27658 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL8A1P27658 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL8A1P27658 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms