Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AP001207.1-201ENST00000524051 481 ntBASIC4.88□□□□□ -1.63
CAPN3P20807 LRRC6P1-201ENST00000532188 885 ntBASIC4.88□□□□□ -1.63
CAPN3P20807 AC005868.1-201ENST00000536421 331 ntBASIC4.88□□□□□ -1.63
CAPN3P20807 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.88□□□□□ -1.63
CAPN3P20807 YWHAZP1-201ENST00000556286 722 ntBASIC4.88□□□□□ -1.63
CAPN3P20807 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.88□□□□□ -1.63
CAPN3P20807 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.88□□□□□ -1.63
CAPN3P20807 ZNF971P-201ENST00000562068 1249 ntBASIC4.88□□□□□ -1.63
CAPN3P20807 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CAPN3P20807 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.88□□□□□ -1.63
CAPN3P20807 AC006116.3-201ENST00000592968 361 ntBASIC4.88□□□□□ -1.63
CAPN3P20807 RPAP2P1-201ENST00000603626 1168 ntBASIC4.88□□□□□ -1.63
CAPN3P20807 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.88□□□□□ -1.63
CAPN3P20807 AP000255.1-201ENST00000610276 676 ntBASIC4.88□□□□□ -1.63
CAPN3P20807 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CAPN3P20807 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.88□□□□□ -1.63
CAPN3P20807 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CAPN3P20807 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CAPN3P20807 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CAPN3P20807 SMG1P4-204ENST00000523028 4131 ntBASIC4.88□□□□□ -1.63
CAPN3P20807 MFSD8-220ENST00000641243 1422 ntBASIC4.88□□□□□ -1.63
CAPN3P20807 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CAPN3P20807 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CAPN3P20807 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CAPN3P20807 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.87□□□□□ -1.63
CAPN3P20807 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CAPN3P20807 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.87□□□□□ -1.63
CAPN3P20807 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
CAPN3P20807 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CAPN3P20807 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CAPN3P20807 AL355852.1-201ENST00000454081 1771 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CAPN3P20807 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CAPN3P20807 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.87□□□□□ -1.63
CAPN3P20807 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CAPN3P20807 RNA5SP339-201ENST00000390987 122 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 AL078599.1-201ENST00000402075 293 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CAPN3P20807 MIR1271-201ENST00000408537 86 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 AL390774.1-201ENST00000411924 246 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.87□□□□□ -1.63
CAPN3P20807 PPIAP17-201ENST00000438507 471 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 RPS29P10-201ENST00000439197 166 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.87□□□□□ -1.63
CAPN3P20807 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CAPN3P20807 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 RPS15AP1-201ENST00000457423 391 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 PRDX3P4-201ENST00000470828 747 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 HMGB1P38-201ENST00000490557 577 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CAPN3P20807 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 AC069306.1-201ENST00000507006 843 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.87□□□□□ -1.63
CAPN3P20807 KRT19P6-201ENST00000510983 209 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 NDUFB4P12-201ENST00000513465 390 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 ENPP7P9-201ENST00000514456 627 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.87□□□□□ -1.63
CAPN3P20807 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.87□□□□□ -1.63
CAPN3P20807 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.87□□□□□ -1.63
CAPN3P20807 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.87□□□□□ -1.63
CAPN3P20807 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CAPN3P20807 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.87□□□□□ -1.63
CAPN3P20807 AC074050.1-201ENST00000563247 211 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CAPN3P20807 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.87□□□□□ -1.63
CAPN3P20807 AGGF1P6-201ENST00000569213 976 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 MIR4504-201ENST00000577413 92 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 MIR3934-201ENST00000579806 107 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.87□□□□□ -1.63
CAPN3P20807 LLPHP1-201ENST00000603571 367 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 TAS2R6P-201ENST00000605022 826 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 AF129408.1-201ENST00000608767 431 ntBASIC4.87□□□□□ -1.63
CAPN3P20807 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.87□□□□□ -1.63
CAPN3P20807 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.87□□□□□ -1.63
CAPN3P20807 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.87□□□□□ -1.63
CAPN3P20807 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.87□□□□□ -1.63
CAPN3P20807 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CAPN3P20807 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CAPN3P20807 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.86□□□□□ -1.63
CAPN3P20807 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.86□□□□□ -1.63
CAPN3P20807 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
CAPN3P20807 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
CAPN3P20807 RNU6-1279P-201ENST00000383917 103 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 SNORA2.3-201ENST00000383920 135 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 SNORA67-201ENST00000384423 137 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 RNU1-77P-201ENST00000390868 162 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 AL359643.1-201ENST00000404109 423 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.86□□□□□ -1.63
CAPN3P20807 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.86□□□□□ -1.63
CAPN3P20807 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.86□□□□□ -1.63
CAPN3P20807 VN1R37P-201ENST00000419096 748 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 PSMA2P3-201ENST00000429685 675 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 FAM96AP1-201ENST00000430879 482 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 AL049745.1-201ENST00000433953 286 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 PSMD10P3-201ENST00000437000 448 ntBASIC4.86□□□□□ -1.63
CAPN3P20807 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.86□□□□□ -1.63
CAPN3P20807 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms