Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
NFKB1P19838 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
NFKB1P19838 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
NFKB1P19838 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.46□□□□□ -1.38
NFKB1P19838 AL359922.3-201ENST00000624779 1670 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NFKB1P19838 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.45□□□□□ -1.38
NFKB1P19838 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NFKB1P19838 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
NFKB1P19838 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
NFKB1P19838 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NFKB1P19838 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
NFKB1P19838 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
NFKB1P19838 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
NFKB1P19838 Y_RNA.128-201ENST00000363391 112 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 SNORD8-201ENST00000363915 110 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 SNORA4.3-201ENST00000365564 137 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 Y_RNA.381-201ENST00000365666 102 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 SNORA69-201ENST00000383895 132 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 RNU6-74P-201ENST00000384235 107 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NFKB1P19838 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
NFKB1P19838 TXNP7-201ENST00000406296 293 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.45□□□□□ -1.38
NFKB1P19838 RNU2-8P-201ENST00000410727 190 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 RNU6-1068P-201ENST00000410958 103 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 RPS6P23-201ENST00000413224 722 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 OR10T1P-201ENST00000424327 947 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.45□□□□□ -1.38
NFKB1P19838 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC6.45□□□□□ -1.38
NFKB1P19838 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.45□□□□□ -1.38
NFKB1P19838 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.45□□□□□ -1.38
NFKB1P19838 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.45□□□□□ -1.38
NFKB1P19838 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.45□□□□□ -1.38
NFKB1P19838 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.45□□□□□ -1.38
NFKB1P19838 FGF7P3-201ENST00000454645 303 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NFKB1P19838 AC073594.1-201ENST00000462065 364 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 RN7SL714P-201ENST00000487050 298 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.45□□□□□ -1.38
NFKB1P19838 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NFKB1P19838 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.45□□□□□ -1.38
NFKB1P19838 AC025674.1-201ENST00000507074 324 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.45□□□□□ -1.38
NFKB1P19838 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NFKB1P19838 AP003181.2-201ENST00000528941 181 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.45□□□□□ -1.38
NFKB1P19838 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
NFKB1P19838 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.45□□□□□ -1.38
NFKB1P19838 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.45□□□□□ -1.38
NFKB1P19838 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC6.45□□□□□ -1.38
NFKB1P19838 RN7SL66P-201ENST00000582099 264 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 AC008638.3-201ENST00000603341 463 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.45□□□□□ -1.38
NFKB1P19838 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NFKB1P19838 AC009248.2-201ENST00000619826 254 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 AC021106.3-201ENST00000623925 531 ntBASIC6.45□□□□□ -1.38
NFKB1P19838 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NFKB1P19838 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.45□□□□□ -1.38
NFKB1P19838 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
NFKB1P19838 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NFKB1P19838 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NFKB1P19838 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NFKB1P19838 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NFKB1P19838 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NFKB1P19838 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NFKB1P19838 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.45□□□□□ -1.38
NFKB1P19838 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.45□□□□□ -1.38
NFKB1P19838 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
NFKB1P19838 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.45□□□□□ -1.38
NFKB1P19838 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
NFKB1P19838 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NFKB1P19838 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.44□□□□□ -1.38
NFKB1P19838 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NFKB1P19838 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.44□□□□□ -1.38
NFKB1P19838 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NFKB1P19838 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.44□□□□□ -1.38
NFKB1P19838 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.44□□□□□ -1.38
NFKB1P19838 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.44□□□□□ -1.38
NFKB1P19838 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.44□□□□□ -1.38
NFKB1P19838 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NFKB1P19838 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NFKB1P19838 OFD1P17-201ENST00000437639 3018 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
NFKB1P19838 AC005294.1-201ENST00000355509 281 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 Y_RNA.145-201ENST00000363527 102 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.44□□□□□ -1.38
NFKB1P19838 RNU6-907P-201ENST00000390924 102 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NFKB1P19838 RPS20P2-201ENST00000402520 389 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 ELOCP4-201ENST00000420090 333 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC6.44□□□□□ -1.38
NFKB1P19838 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
NFKB1P19838 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC6.44□□□□□ -1.38
NFKB1P19838 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.44□□□□□ -1.38
NFKB1P19838 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.44□□□□□ -1.38
NFKB1P19838 RSU1P2-202ENST00000437884 485 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 CACYBPP1-201ENST00000438592 684 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 IPO7P1-201ENST00000442031 636 ntBASIC6.44□□□□□ -1.38
NFKB1P19838 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms