Protein–RNA interactions for Protein: P12109

COL6A1, Collagen alpha-1(VI) chain, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1P12109 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.97□□□□□ -1.45
COL6A1P12109 AL035458.1-201ENST00000433096 585 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 NEK4P1-201ENST00000433383 879 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 AL353597.2-202ENST00000434901 373 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.97□□□□□ -1.45
COL6A1P12109 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.97□□□□□ -1.45
COL6A1P12109 MTCYBP1-201ENST00000454315 1119 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 RNU6-1218P-201ENST00000458990 108 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 RPL7P48-201ENST00000461513 746 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 RPS20P4-201ENST00000461659 355 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 RPL23AP12-201ENST00000467573 473 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 AC068587.1-201ENST00000483613 781 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 AC107398.1-201ENST00000486904 505 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.97□□□□□ -1.45
COL6A1P12109 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.97□□□□□ -1.45
COL6A1P12109 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.97□□□□□ -1.45
COL6A1P12109 OR7H2P-201ENST00000513483 306 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.97□□□□□ -1.45
COL6A1P12109 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.97□□□□□ -1.45
COL6A1P12109 RNU6-1004P-201ENST00000516584 111 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.97□□□□□ -1.45
COL6A1P12109 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.97□□□□□ -1.45
COL6A1P12109 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.97□□□□□ -1.45
COL6A1P12109 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.97□□□□□ -1.45
COL6A1P12109 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL6A1P12109 AC092851.1-201ENST00000535964 478 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 OR11H3P-201ENST00000554547 982 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.97□□□□□ -1.45
COL6A1P12109 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.97□□□□□ -1.45
COL6A1P12109 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.97□□□□□ -1.45
COL6A1P12109 AL390334.1-201ENST00000556395 450 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 CYP2C60P-201ENST00000566088 139 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 AC006539.2-201ENST00000601729 572 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 AL136363.2-201ENST00000604173 851 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 AC116447.1-201ENST00000613153 453 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 MIR6780A-201ENST00000615089 68 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 AC016717.3-201ENST00000624730 554 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL6A1P12109 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL6A1P12109 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
COL6A1P12109 AC140134.1-201ENST00000511830 3544 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
COL6A1P12109 SMG1P6-201ENST00000532337 2930 ntBASIC5.97□□□□□ -1.45
COL6A1P12109 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
COL6A1P12109 AC087359.1-201ENST00000508335 1740 ntBASIC5.96□□□□□ -1.45
COL6A1P12109 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.96□□□□□ -1.45
COL6A1P12109 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
COL6A1P12109 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
COL6A1P12109 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
COL6A1P12109 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
COL6A1P12109 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL6A1P12109 AC079741.1-201ENST00000321498 212 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL6A1P12109 RN7SKP95-201ENST00000362860 303 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 RNU1-59P-201ENST00000364829 162 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.96□□□□□ -1.46
COL6A1P12109 Y_RNA.517-201ENST00000384551 106 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 RNA5SP296-201ENST00000410523 111 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 RNU2-16P-201ENST00000410712 136 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 MTND1P23-201ENST00000416931 372 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 RPS26P47-201ENST00000427219 348 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.96□□□□□ -1.46
COL6A1P12109 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.96□□□□□ -1.46
COL6A1P12109 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 AC092641.1-201ENST00000440229 772 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 ELOCP10-201ENST00000440624 327 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 AL357520.1-201ENST00000441557 453 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.96□□□□□ -1.46
COL6A1P12109 AL356981.1-201ENST00000454879 684 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.96□□□□□ -1.46
COL6A1P12109 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.96□□□□□ -1.46
COL6A1P12109 ARL4AP1-201ENST00000503220 705 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 MTATP6P22-201ENST00000507369 598 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 MTND4LP26-201ENST00000518144 282 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.96□□□□□ -1.46
COL6A1P12109 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.96□□□□□ -1.46
COL6A1P12109 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.96□□□□□ -1.46
COL6A1P12109 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.96□□□□□ -1.46
COL6A1P12109 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.96□□□□□ -1.46
COL6A1P12109 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.96□□□□□ -1.46
COL6A1P12109 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.96□□□□□ -1.46
COL6A1P12109 AC074051.3-201ENST00000570238 358 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 EIF1P4-201ENST00000572664 335 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 AP005403.1-201ENST00000579720 229 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 MIR4270-201ENST00000581799 70 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.96□□□□□ -1.46
COL6A1P12109 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.96□□□□□ -1.46
COL6A1P12109 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.96□□□□□ -1.46
COL6A1P12109 AC006272.2-201ENST00000594725 163 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 AC079089.3-201ENST00000603094 673 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 ELOCP34-201ENST00000604436 327 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 AC009597.2-201ENST00000604659 592 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 AC018618.2-201ENST00000604770 446 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.96□□□□□ -1.46
COL6A1P12109 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.96□□□□□ -1.46
COL6A1P12109 U1.25-201ENST00000614085 162 ntBASIC5.96□□□□□ -1.46
COL6A1P12109 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.96□□□□□ -1.46
COL6A1P12109 AC009878.1-201ENST00000621819 340 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms