Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.77□□□□□ -1.65
PCNAP12004 BNIP3P4-201ENST00000604946 565 ntBASIC4.77□□□□□ -1.65
PCNAP12004 AL627230.1-201ENST00000613077 211 ntBASIC4.77□□□□□ -1.65
PCNAP12004 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.77□□□□□ -1.65
PCNAP12004 AL591926.8-201ENST00000616876 211 ntBASIC4.77□□□□□ -1.65
PCNAP12004 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.77□□□□□ -1.65
PCNAP12004 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.77□□□□□ -1.65
PCNAP12004 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCNAP12004 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCNAP12004 TLK1P1-201ENST00000456760 2440 ntBASIC4.77□□□□□ -1.65
PCNAP12004 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PCNAP12004 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCNAP12004 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCNAP12004 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCNAP12004 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.77□□□□□ -1.65
PCNAP12004 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCNAP12004 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.76□□□□□ -1.65
PCNAP12004 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.76□□□□□ -1.65
PCNAP12004 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCNAP12004 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.76□□□□□ -1.65
PCNAP12004 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCNAP12004 AC011155.1-201ENST00000316512 456 ntBASIC4.76□□□□□ -1.65
PCNAP12004 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
PCNAP12004 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PCNAP12004 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
PCNAP12004 RNU6-317P-201ENST00000384031 107 ntBASIC4.76□□□□□ -1.65
PCNAP12004 RNU1-106P-201ENST00000384382 164 ntBASIC4.76□□□□□ -1.65
PCNAP12004 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCNAP12004 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
PCNAP12004 Z97832.1-201ENST00000402490 328 ntBASIC4.76□□□□□ -1.65
PCNAP12004 AL021331.1-201ENST00000402817 582 ntBASIC4.76□□□□□ -1.65
PCNAP12004 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.76□□□□□ -1.65
PCNAP12004 GJA6P-201ENST00000415117 1042 ntBASIC4.76□□□□□ -1.65
PCNAP12004 AL445487.1-201ENST00000415694 1580 ntBASIC4.76□□□□□ -1.65
PCNAP12004 AF186996.5-201ENST00000418098 904 ntBASIC4.76□□□□□ -1.65
PCNAP12004 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCNAP12004 MTCO3P21-201ENST00000430791 643 ntBASIC4.76□□□□□ -1.65
PCNAP12004 RHOT1P3-201ENST00000436571 331 ntBASIC4.76□□□□□ -1.65
PCNAP12004 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.76□□□□□ -1.65
PCNAP12004 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCNAP12004 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.76□□□□□ -1.65
PCNAP12004 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.76□□□□□ -1.65
PCNAP12004 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.76□□□□□ -1.65
PCNAP12004 AC005532.2-201ENST00000467154 373 ntBASIC4.76□□□□□ -1.65
PCNAP12004 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.76□□□□□ -1.65
PCNAP12004 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.76□□□□□ -1.65
PCNAP12004 AC079203.1-201ENST00000487972 404 ntBASIC4.76□□□□□ -1.65
PCNAP12004 RN7SL629P-201ENST00000489622 285 ntBASIC4.76□□□□□ -1.65
PCNAP12004 RPL21P131-201ENST00000497298 483 ntBASIC4.76□□□□□ -1.65
PCNAP12004 AC098862.1-201ENST00000504991 413 ntBASIC4.76□□□□□ -1.65
PCNAP12004 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.76□□□□□ -1.65
PCNAP12004 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCNAP12004 RN7SKP287-201ENST00000516546 266 ntBASIC4.76□□□□□ -1.65
PCNAP12004 AC090819.1-201ENST00000523800 1111 ntBASIC4.76□□□□□ -1.65
PCNAP12004 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.76□□□□□ -1.65
PCNAP12004 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.76□□□□□ -1.65
PCNAP12004 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.76□□□□□ -1.65
PCNAP12004 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.76□□□□□ -1.65
PCNAP12004 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.76□□□□□ -1.65
PCNAP12004 HNRNPCP4-201ENST00000571636 900 ntBASIC4.76□□□□□ -1.65
PCNAP12004 MIR4691-201ENST00000583764 85 ntBASIC4.76□□□□□ -1.65
PCNAP12004 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.76□□□□□ -1.65
PCNAP12004 AC009948.4-201ENST00000604692 675 ntBASIC4.76□□□□□ -1.65
PCNAP12004 AC093424.1-201ENST00000604999 338 ntBASIC4.76□□□□□ -1.65
PCNAP12004 AL392112.1-201ENST00000605115 829 ntBASIC4.76□□□□□ -1.65
PCNAP12004 AC093799.2-201ENST00000610062 578 ntBASIC4.76□□□□□ -1.65
PCNAP12004 AL512624.1-201ENST00000613638 469 ntBASIC4.76□□□□□ -1.65
PCNAP12004 AL023881.1-201ENST00000621088 301 ntBASIC4.76□□□□□ -1.65
PCNAP12004 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.76□□□□□ -1.65
PCNAP12004 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.76□□□□□ -1.65
PCNAP12004 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PCNAP12004 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCNAP12004 AL672167.1-203ENST00000641299 2975 ntBASIC4.76□□□□□ -1.65
PCNAP12004 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCNAP12004 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCNAP12004 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PCNAP12004 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.76□□□□□ -1.65
PCNAP12004 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCNAP12004 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCNAP12004 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCNAP12004 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCNAP12004 AC104446.1-201ENST00000613728 1321 ntBASIC4.75□□□□□ -1.65
PCNAP12004 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCNAP12004 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
PCNAP12004 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
PCNAP12004 DDX18P4-201ENST00000511690 1966 ntBASIC4.75□□□□□ -1.65
PCNAP12004 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
PCNAP12004 AC009643.2-201ENST00000603543 1448 ntBASIC4.75□□□□□ -1.65
PCNAP12004 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.75□□□□□ -1.65
PCNAP12004 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCNAP12004 ANKRD36P1-201ENST00000344424 659 ntBASIC4.75□□□□□ -1.65
PCNAP12004 RNU6-1339P-201ENST00000363574 91 ntBASIC4.75□□□□□ -1.65
PCNAP12004 U8.4-201ENST00000363626 134 ntBASIC4.75□□□□□ -1.65
PCNAP12004 RNA5SP428-201ENST00000365129 132 ntBASIC4.75□□□□□ -1.65
PCNAP12004 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.75□□□□□ -1.65
PCNAP12004 AC114814.2-201ENST00000419195 485 ntBASIC4.75□□□□□ -1.65
PCNAP12004 OR2X1P-201ENST00000421144 687 ntBASIC4.75□□□□□ -1.65
PCNAP12004 HIGD1AP12-201ENST00000427832 281 ntBASIC4.75□□□□□ -1.65
PCNAP12004 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.75□□□□□ -1.65
PCNAP12004 AC092162.1-201ENST00000432828 434 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms