Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC022882.1-201ENST00000532142 501 ntBASIC3.61□□□□□ -1.83
FREM3P0C091 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.61□□□□□ -1.83
FREM3P0C091 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.61□□□□□ -1.83
FREM3P0C091 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.61□□□□□ -1.83
FREM3P0C091 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.61□□□□□ -1.83
FREM3P0C091 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.61□□□□□ -1.83
FREM3P0C091 QTRT1P1-201ENST00000604344 1078 ntBASIC3.61□□□□□ -1.83
FREM3P0C091 AC091167.4-201ENST00000605079 184 ntBASIC3.61□□□□□ -1.83
FREM3P0C091 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.61□□□□□ -1.83
FREM3P0C091 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
FREM3P0C091 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
FREM3P0C091 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.61□□□□□ -1.83
FREM3P0C091 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.61□□□□□ -1.83
FREM3P0C091 CASC19-261ENST00000641853 1638 ntBASIC3.61□□□□□ -1.83
FREM3P0C091 U8.11-201ENST00000384699 133 ntBASIC3.61□□□□□ -1.83
FREM3P0C091 U8.12-201ENST00000384701 133 ntBASIC3.61□□□□□ -1.83
FREM3P0C091 RNA5SP171-201ENST00000391071 115 ntBASIC3.61□□□□□ -1.83
FREM3P0C091 SNORA3C-201ENST00000408792 125 ntBASIC3.61□□□□□ -1.83
FREM3P0C091 TRGV5P-201ENST00000419915 354 ntBASIC3.61□□□□□ -1.83
FREM3P0C091 OR4F13P-201ENST00000428478 931 ntBASIC3.61□□□□□ -1.83
FREM3P0C091 AC083863.1-201ENST00000438811 231 ntBASIC3.61□□□□□ -1.83
FREM3P0C091 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.61□□□□□ -1.83
FREM3P0C091 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.61□□□□□ -1.83
FREM3P0C091 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
FREM3P0C091 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.61□□□□□ -1.83
FREM3P0C091 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.61□□□□□ -1.83
FREM3P0C091 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.61□□□□□ -1.83
FREM3P0C091 U8.18-201ENST00000459285 133 ntBASIC3.61□□□□□ -1.83
FREM3P0C091 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.61□□□□□ -1.83
FREM3P0C091 MYL12AP1-201ENST00000518490 515 ntBASIC3.61□□□□□ -1.83
FREM3P0C091 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.61□□□□□ -1.83
FREM3P0C091 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.61□□□□□ -1.83
FREM3P0C091 AC008011.1-201ENST00000545989 227 ntBASIC3.61□□□□□ -1.83
FREM3P0C091 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.61□□□□□ -1.83
FREM3P0C091 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.61□□□□□ -1.83
FREM3P0C091 AC068020.1-201ENST00000594215 661 ntBASIC3.61□□□□□ -1.83
FREM3P0C091 AL137849.1-201ENST00000604767 169 ntBASIC3.61□□□□□ -1.83
FREM3P0C091 AC114878.2-201ENST00000604863 1251 ntBASIC3.61□□□□□ -1.83
FREM3P0C091 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.61□□□□□ -1.83
FREM3P0C091 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.61□□□□□ -1.83
FREM3P0C091 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.61□□□□□ -1.83
FREM3P0C091 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
FREM3P0C091 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
FREM3P0C091 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
FREM3P0C091 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
FREM3P0C091 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
FREM3P0C091 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
FREM3P0C091 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
FREM3P0C091 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
FREM3P0C091 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.6□□□□□ -1.83
FREM3P0C091 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.6□□□□□ -1.83
FREM3P0C091 AL160275.2-201ENST00000412010 394 ntBASIC3.6□□□□□ -1.83
FREM3P0C091 LINC01881-201ENST00000416103 412 ntBASIC3.6□□□□□ -1.83
FREM3P0C091 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.6□□□□□ -1.83
FREM3P0C091 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.6□□□□□ -1.83
FREM3P0C091 AC034236.1-201ENST00000469891 373 ntBASIC3.6□□□□□ -1.83
FREM3P0C091 RN7SL585P-201ENST00000470538 280 ntBASIC3.6□□□□□ -1.83
FREM3P0C091 IGHV3-63-201ENST00000518422 341 ntBASIC3.6□□□□□ -1.83
FREM3P0C091 TRMT10BP1-201ENST00000519377 943 ntBASIC3.6□□□□□ -1.83
FREM3P0C091 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.6□□□□□ -1.83
FREM3P0C091 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.6□□□□□ -1.83
FREM3P0C091 MAPK10-320ENST00000641462 6696 ntBASIC3.6□□□□□ -1.83
FREM3P0C091 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
FREM3P0C091 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.6□□□□□ -1.83
FREM3P0C091 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.6□□□□□ -1.83
FREM3P0C091 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
FREM3P0C091 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
FREM3P0C091 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
FREM3P0C091 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
FREM3P0C091 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.6□□□□□ -1.83
FREM3P0C091 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
FREM3P0C091 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
FREM3P0C091 KPNA2P2-201ENST00000419546 1489 ntBASIC3.59□□□□□ -1.83
FREM3P0C091 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.59□□□□□ -1.83
FREM3P0C091 MIR23B-201ENST00000384832 97 ntBASIC3.59□□□□□ -1.83
FREM3P0C091 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.59□□□□□ -1.83
FREM3P0C091 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
FREM3P0C091 FABP3P2-201ENST00000453169 399 ntBASIC3.59□□□□□ -1.83
FREM3P0C091 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.59□□□□□ -1.83
FREM3P0C091 SAP18P1-201ENST00000512058 390 ntBASIC3.59□□□□□ -1.83
FREM3P0C091 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.59□□□□□ -1.83
FREM3P0C091 MIR4429-201ENST00000580105 73 ntBASIC3.59□□□□□ -1.83
FREM3P0C091 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.59□□□□□ -1.83
FREM3P0C091 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.59□□□□□ -1.83
FREM3P0C091 AC009237.17-201ENST00000618111 748 ntBASIC3.59□□□□□ -1.83
FREM3P0C091 AC079684.1-201ENST00000621405 437 ntBASIC3.59□□□□□ -1.83
FREM3P0C091 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC3.59□□□□□ -1.83
FREM3P0C091 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
FREM3P0C091 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.59□□□□□ -1.83
FREM3P0C091 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
FREM3P0C091 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
FREM3P0C091 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
FREM3P0C091 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
FREM3P0C091 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.59□□□□□ -1.83
FREM3P0C091 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
FREM3P0C091 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
FREM3P0C091 SNORA5A-201ENST00000384111 134 ntBASIC3.59□□□□□ -1.84
FREM3P0C091 AL139039.2-201ENST00000407436 479 ntBASIC3.59□□□□□ -1.84
FREM3P0C091 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.59□□□□□ -1.84
FREM3P0C091 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms