Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AL031985.3-201ENST00000565390 2449 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 HSPD1P11-201ENST00000508643 1702 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 RPL23AP48-201ENST00000406913 488 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 MTCO1P54-201ENST00000430139 712 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AC096638.2-201ENST00000434965 711 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 PHBP16-201ENST00000446318 950 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 SNORA70.17-201ENST00000516449 133 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 MIR2114-201ENST00000516645 80 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 OR8G5-201ENST00000524943 1041 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AC087888.1-201ENST00000550884 1254 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 MRPS35P3-201ENST00000603189 709 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AC104662.1-201ENST00000604448 511 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AC073111.2-201ENST00000605657 1075 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AC034236.3-201ENST00000605999 461 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AC090948.1-201ENST00000607464 549 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AC092159.4-201ENST00000624944 550 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HLA-DPB1P04440 AL627171.1-201ENST00000618845 1308 ntBASIC3.72□□□□□ -1.81
HLA-DPB1P04440 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 OR5P1P-201ENST00000299512 925 ntBASIC3.72□□□□□ -1.81
HLA-DPB1P04440 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 MIR421-201ENST00000365696 85 ntBASIC3.72□□□□□ -1.81
HLA-DPB1P04440 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 AL583835.1-201ENST00000399570 407 ntBASIC3.72□□□□□ -1.81
HLA-DPB1P04440 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 RPL7P4-203ENST00000430239 730 ntBASIC3.72□□□□□ -1.81
HLA-DPB1P04440 MTND2P2-201ENST00000434633 945 ntBASIC3.72□□□□□ -1.81
HLA-DPB1P04440 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 Z95152.1-201ENST00000453556 656 ntBASIC3.72□□□□□ -1.81
HLA-DPB1P04440 RPL23AP24-201ENST00000458203 385 ntBASIC3.72□□□□□ -1.81
HLA-DPB1P04440 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 RPL31P61-201ENST00000496160 376 ntBASIC3.72□□□□□ -1.81
HLA-DPB1P04440 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 AC010476.1-201ENST00000519111 851 ntBASIC3.72□□□□□ -1.81
HLA-DPB1P04440 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 AL354984.3-201ENST00000604803 325 ntBASIC3.72□□□□□ -1.81
HLA-DPB1P04440 AC096553.1-201ENST00000605169 829 ntBASIC3.72□□□□□ -1.81
HLA-DPB1P04440 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 AC025175.1-201ENST00000606482 759 ntBASIC3.72□□□□□ -1.81
HLA-DPB1P04440 AL035461.2-201ENST00000619201 524 ntBASIC3.72□□□□□ -1.81
HLA-DPB1P04440 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 AC019080.5-201ENST00000624891 757 ntBASIC3.72□□□□□ -1.81
HLA-DPB1P04440 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DPB1P04440 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
HLA-DPB1P04440 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 SNORA56-201ENST00000383966 129 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 MIR7-1-201ENST00000384871 110 ntBASIC3.71□□□□□ -1.82
HLA-DPB1P04440 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.71□□□□□ -1.82
HLA-DPB1P04440 RPA2P2-201ENST00000419698 796 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms