Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 HMGB2P1-201ENST00000591146 634 ntBASIC3.7□□□□□ -1.82
SPTA1P02549 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.7□□□□□ -1.82
SPTA1P02549 AC243312.2-201ENST00000623340 601 ntBASIC3.7□□□□□ -1.82
SPTA1P02549 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC3.7□□□□□ -1.82
SPTA1P02549 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC3.7□□□□□ -1.82
SPTA1P02549 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.7□□□□□ -1.82
SPTA1P02549 RNU11-201ENST00000387069 134 ntBASIC3.7□□□□□ -1.82
SPTA1P02549 RNU2-65P-201ENST00000410162 185 ntBASIC3.7□□□□□ -1.82
SPTA1P02549 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.7□□□□□ -1.82
SPTA1P02549 MTCO1P45-201ENST00000431457 267 ntBASIC3.7□□□□□ -1.82
SPTA1P02549 AC006994.1-201ENST00000438212 839 ntBASIC3.7□□□□□ -1.82
SPTA1P02549 DNAJC19P8-201ENST00000452887 259 ntBASIC3.7□□□□□ -1.82
SPTA1P02549 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.7□□□□□ -1.82
SPTA1P02549 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.7□□□□□ -1.82
SPTA1P02549 AL360012.1-201ENST00000602813 131 ntBASIC3.7□□□□□ -1.82
SPTA1P02549 MIR6891-201ENST00000618788 93 ntBASIC3.7□□□□□ -1.82
SPTA1P02549 AC119744.1-201ENST00000454746 1715 ntBASIC3.7□□□□□ -1.82
SPTA1P02549 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
SPTA1P02549 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SPTA1P02549 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SPTA1P02549 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SPTA1P02549 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC3.69□□□□□ -1.82
SPTA1P02549 AC093671.1-201ENST00000624981 2929 ntBASIC3.69□□□□□ -1.82
SPTA1P02549 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SPTA1P02549 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SPTA1P02549 MTND4LP20-201ENST00000402379 270 ntBASIC3.69□□□□□ -1.82
SPTA1P02549 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.69□□□□□ -1.82
SPTA1P02549 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC3.69□□□□□ -1.82
SPTA1P02549 PRDX3P3-201ENST00000447765 522 ntBASIC3.69□□□□□ -1.82
SPTA1P02549 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.69□□□□□ -1.82
SPTA1P02549 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC3.69□□□□□ -1.82
SPTA1P02549 AL121576.1-201ENST00000556055 276 ntBASIC3.69□□□□□ -1.82
SPTA1P02549 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.69□□□□□ -1.82
SPTA1P02549 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.69□□□□□ -1.82
SPTA1P02549 AL713922.2-201ENST00000619384 716 ntBASIC3.69□□□□□ -1.82
SPTA1P02549 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC3.69□□□□□ -1.82
SPTA1P02549 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SPTA1P02549 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SPTA1P02549 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.69□□□□□ -1.82
SPTA1P02549 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.69□□□□□ -1.82
SPTA1P02549 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SPTA1P02549 MIR449A-201ENST00000362113 91 ntBASIC3.69□□□□□ -1.82
SPTA1P02549 RPS20P14-201ENST00000412545 360 ntBASIC3.69□□□□□ -1.82
SPTA1P02549 AL356968.2-201ENST00000412769 1257 ntBASIC3.69□□□□□ -1.82
SPTA1P02549 AC079809.1-201ENST00000415468 276 ntBASIC3.69□□□□□ -1.82
SPTA1P02549 AC006011.1-201ENST00000442758 349 ntBASIC3.69□□□□□ -1.82
SPTA1P02549 SERPINA7P1-201ENST00000443077 631 ntBASIC3.69□□□□□ -1.82
SPTA1P02549 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SPTA1P02549 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.69□□□□□ -1.82
SPTA1P02549 CYCSP53-201ENST00000455540 265 ntBASIC3.69□□□□□ -1.82
SPTA1P02549 Y_RNA.638-201ENST00000459374 113 ntBASIC3.69□□□□□ -1.82
SPTA1P02549 RPL29P14-201ENST00000495837 428 ntBASIC3.69□□□□□ -1.82
SPTA1P02549 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.69□□□□□ -1.82
SPTA1P02549 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.69□□□□□ -1.82
SPTA1P02549 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.69□□□□□ -1.82
SPTA1P02549 SUMO2P19-201ENST00000518920 295 ntBASIC3.69□□□□□ -1.82
SPTA1P02549 HIGD1AP18-201ENST00000520730 278 ntBASIC3.69□□□□□ -1.82
SPTA1P02549 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.69□□□□□ -1.82
SPTA1P02549 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.69□□□□□ -1.82
SPTA1P02549 AP002360.3-201ENST00000607673 710 ntBASIC3.69□□□□□ -1.82
SPTA1P02549 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
SPTA1P02549 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SPTA1P02549 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SPTA1P02549 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SPTA1P02549 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC3.68□□□□□ -1.82
SPTA1P02549 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SPTA1P02549 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SPTA1P02549 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.68□□□□□ -1.82
SPTA1P02549 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SPTA1P02549 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
SPTA1P02549 OR11H4-201ENST00000315409 1082 ntBASIC3.68□□□□□ -1.82
SPTA1P02549 RNA5SP175-201ENST00000364275 119 ntBASIC3.68□□□□□ -1.82
SPTA1P02549 ZNF602P-201ENST00000405929 924 ntBASIC3.68□□□□□ -1.82
SPTA1P02549 AL590609.2-201ENST00000421430 368 ntBASIC3.68□□□□□ -1.82
SPTA1P02549 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.68□□□□□ -1.82
SPTA1P02549 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.68□□□□□ -1.82
SPTA1P02549 AC118465.1-201ENST00000513820 1271 ntBASIC3.68□□□□□ -1.82
SPTA1P02549 RNA5SP249-201ENST00000516127 99 ntBASIC3.68□□□□□ -1.82
SPTA1P02549 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.68□□□□□ -1.82
SPTA1P02549 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.68□□□□□ -1.82
SPTA1P02549 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.68□□□□□ -1.82
SPTA1P02549 MIR6868-201ENST00000611215 58 ntBASIC3.68□□□□□ -1.82
SPTA1P02549 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.68□□□□□ -1.82
SPTA1P02549 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SPTA1P02549 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SPTA1P02549 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
SPTA1P02549 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SPTA1P02549 AC083899.2-201ENST00000423285 1376 ntBASIC3.68□□□□□ -1.82
SPTA1P02549 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SPTA1P02549 LINC00561-201ENST00000565815 2738 ntBASIC3.68□□□□□ -1.82
SPTA1P02549 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
SPTA1P02549 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SPTA1P02549 AL161631.1-201ENST00000417933 486 ntBASIC3.68□□□□□ -1.82
SPTA1P02549 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.68□□□□□ -1.82
SPTA1P02549 MIR4672-201ENST00000583126 81 ntBASIC3.68□□□□□ -1.82
SPTA1P02549 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.68□□□□□ -1.82
SPTA1P02549 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.68□□□□□ -1.82
SPTA1P02549 AC100778.3-201ENST00000580060 1750 ntBASIC3.67□□□□□ -1.82
SPTA1P02549 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SPTA1P02549 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms