Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC017104.4-201ENST00000636283 1592 ntBASIC3.93□□□□□ -1.78
TNFP01375 AP002001.2-201ENST00000529025 1469 ntBASIC3.92□□□□□ -1.78
TNFP01375 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.92□□□□□ -1.78
TNFP01375 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.92□□□□□ -1.78
TNFP01375 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.92□□□□□ -1.78
TNFP01375 AC005332.5-201ENST00000591222 2919 ntBASIC3.92□□□□□ -1.78
TNFP01375 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TNFP01375 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TNFP01375 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
TNFP01375 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TNFP01375 AL359837.1-201ENST00000381357 287 ntBASIC3.92□□□□□ -1.78
TNFP01375 MIR23B-201ENST00000384832 97 ntBASIC3.92□□□□□ -1.78
TNFP01375 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TNFP01375 MIR1251-201ENST00000408552 70 ntBASIC3.92□□□□□ -1.78
TNFP01375 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.92□□□□□ -1.78
TNFP01375 HIGD1AP4-201ENST00000430194 280 ntBASIC3.92□□□□□ -1.78
TNFP01375 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.92□□□□□ -1.78
TNFP01375 GEMIN8P3-201ENST00000445417 720 ntBASIC3.92□□□□□ -1.78
TNFP01375 AC044797.1-201ENST00000445744 679 ntBASIC3.92□□□□□ -1.78
TNFP01375 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.92□□□□□ -1.78
TNFP01375 OR9M1P-201ENST00000459641 921 ntBASIC3.92□□□□□ -1.78
TNFP01375 RN7SL542P-201ENST00000467147 294 ntBASIC3.92□□□□□ -1.78
TNFP01375 RN7SL585P-201ENST00000470538 280 ntBASIC3.92□□□□□ -1.78
TNFP01375 RPS26P28-201ENST00000470806 348 ntBASIC3.92□□□□□ -1.78
TNFP01375 PPIAP15-201ENST00000479662 484 ntBASIC3.92□□□□□ -1.78
TNFP01375 OR9N1P-201ENST00000491296 333 ntBASIC3.92□□□□□ -1.78
TNFP01375 AC021146.3-201ENST00000511911 260 ntBASIC3.92□□□□□ -1.78
TNFP01375 RPS27AP18-201ENST00000515536 459 ntBASIC3.92□□□□□ -1.78
TNFP01375 RN7SKP141-201ENST00000516167 338 ntBASIC3.92□□□□□ -1.78
TNFP01375 IGLV3-26-201ENST00000520756 302 ntBASIC3.92□□□□□ -1.78
TNFP01375 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.92□□□□□ -1.78
TNFP01375 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.92□□□□□ -1.78
TNFP01375 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
TNFP01375 AC079171.1-201ENST00000568788 914 ntBASIC3.92□□□□□ -1.78
TNFP01375 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.92□□□□□ -1.78
TNFP01375 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.92□□□□□ -1.78
TNFP01375 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.92□□□□□ -1.78
TNFP01375 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.92□□□□□ -1.78
TNFP01375 AC015922.4-201ENST00000612568 690 ntBASIC3.92□□□□□ -1.78
TNFP01375 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
TNFP01375 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TNFP01375 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
TNFP01375 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TNFP01375 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
TNFP01375 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TNFP01375 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
TNFP01375 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
TNFP01375 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
TNFP01375 RPS24P12-201ENST00000402084 394 ntBASIC3.91□□□□□ -1.78
TNFP01375 AL590704.1-201ENST00000402856 794 ntBASIC3.91□□□□□ -1.78
TNFP01375 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
TNFP01375 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.91□□□□□ -1.78
TNFP01375 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.91□□□□□ -1.78
TNFP01375 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.91□□□□□ -1.78
TNFP01375 RRM2P4-201ENST00000441721 562 ntBASIC3.91□□□□□ -1.78
TNFP01375 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.91□□□□□ -1.78
TNFP01375 RPL23AP2-201ENST00000471227 466 ntBASIC3.91□□□□□ -1.78
TNFP01375 SLC25A15P5-201ENST00000508033 253 ntBASIC3.91□□□□□ -1.78
TNFP01375 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.91□□□□□ -1.78
TNFP01375 MTND1P6-201ENST00000523621 946 ntBASIC3.91□□□□□ -1.78
TNFP01375 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TNFP01375 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TNFP01375 AL121834.1-201ENST00000572284 509 ntBASIC3.91□□□□□ -1.78
TNFP01375 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.91□□□□□ -1.78
TNFP01375 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.91□□□□□ -1.78
TNFP01375 AC104662.1-201ENST00000604448 511 ntBASIC3.91□□□□□ -1.78
TNFP01375 AC245389.1-201ENST00000605141 529 ntBASIC3.91□□□□□ -1.78
TNFP01375 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.91□□□□□ -1.78
TNFP01375 AC055839.1-201ENST00000634467 498 ntBASIC3.91□□□□□ -1.78
TNFP01375 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TNFP01375 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
TNFP01375 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
TNFP01375 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TNFP01375 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.91□□□□□ -1.78
TNFP01375 LINC01109-201ENST00000603837 3081 ntBASIC3.91□□□□□ -1.78
TNFP01375 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
TNFP01375 MARK2P15-201ENST00000432204 2186 ntBASIC3.9□□□□□ -1.78
TNFP01375 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TNFP01375 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.9□□□□□ -1.78
TNFP01375 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.9□□□□□ -1.78
TNFP01375 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TNFP01375 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TNFP01375 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
TNFP01375 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.9□□□□□ -1.78
TNFP01375 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TNFP01375 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.9□□□□□ -1.78
TNFP01375 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.9□□□□□ -1.79
TNFP01375 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
TNFP01375 AL672167.2-201ENST00000377164 879 ntBASIC3.9□□□□□ -1.79
TNFP01375 MIR30B-201ENST00000384850 88 ntBASIC3.9□□□□□ -1.79
TNFP01375 PTMAP2-201ENST00000397627 327 ntBASIC3.9□□□□□ -1.79
TNFP01375 SNORA3.3-201ENST00000408712 125 ntBASIC3.9□□□□□ -1.79
TNFP01375 RNA5SP146-201ENST00000410743 123 ntBASIC3.9□□□□□ -1.79
TNFP01375 RPL7AP73-201ENST00000413490 353 ntBASIC3.9□□□□□ -1.79
TNFP01375 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TNFP01375 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.9□□□□□ -1.79
TNFP01375 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.9□□□□□ -1.79
TNFP01375 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.9□□□□□ -1.79
TNFP01375 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.9□□□□□ -1.79
TNFP01375 EIF2S2P5-201ENST00000457635 968 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms