Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
CTDNEP1O95476 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTDNEP1O95476 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
CTDNEP1O95476 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CTDNEP1O95476 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.53□□□□□ -1.68
CTDNEP1O95476 AL450992.3-201ENST00000413192 568 ntBASIC4.53□□□□□ -1.68
CTDNEP1O95476 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.53□□□□□ -1.68
CTDNEP1O95476 AF228730.2-201ENST00000438784 848 ntBASIC4.53□□□□□ -1.68
CTDNEP1O95476 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.53□□□□□ -1.68
CTDNEP1O95476 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.53□□□□□ -1.68
CTDNEP1O95476 MTND2P25-201ENST00000449028 610 ntBASIC4.53□□□□□ -1.68
CTDNEP1O95476 AC239798.3-201ENST00000454459 408 ntBASIC4.53□□□□□ -1.68
CTDNEP1O95476 PPIAP21-201ENST00000464473 501 ntBASIC4.53□□□□□ -1.68
CTDNEP1O95476 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.53□□□□□ -1.68
CTDNEP1O95476 BTF3L4P4-201ENST00000506381 449 ntBASIC4.53□□□□□ -1.68
CTDNEP1O95476 RNU6-352P-201ENST00000516908 107 ntBASIC4.53□□□□□ -1.68
CTDNEP1O95476 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.53□□□□□ -1.68
CTDNEP1O95476 AC090312.1-201ENST00000580637 348 ntBASIC4.53□□□□□ -1.68
CTDNEP1O95476 AL136295.6-201ENST00000610486 658 ntBASIC4.53□□□□□ -1.68
CTDNEP1O95476 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.53□□□□□ -1.68
CTDNEP1O95476 AC112484.5-201ENST00000624189 228 ntBASIC4.53□□□□□ -1.68
CTDNEP1O95476 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CTDNEP1O95476 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTDNEP1O95476 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CTDNEP1O95476 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CTDNEP1O95476 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CTDNEP1O95476 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CTDNEP1O95476 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTDNEP1O95476 CR382285.2-201ENST00000624662 1495 ntBASIC4.52□□□□□ -1.69
CTDNEP1O95476 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CTDNEP1O95476 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 MIR199A2-201ENST00000385289 110 ntBASIC4.52□□□□□ -1.69
CTDNEP1O95476 RPS26P8-201ENST00000393490 348 ntBASIC4.52□□□□□ -1.69
CTDNEP1O95476 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 RCC2P2-201ENST00000422174 918 ntBASIC4.52□□□□□ -1.69
CTDNEP1O95476 YY1P1-201ENST00000427625 668 ntBASIC4.52□□□□□ -1.69
CTDNEP1O95476 C4BPAP2-201ENST00000428434 478 ntBASIC4.52□□□□□ -1.69
CTDNEP1O95476 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTDNEP1O95476 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 KCTD9P6-201ENST00000522306 950 ntBASIC4.52□□□□□ -1.69
CTDNEP1O95476 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 MIR4675-201ENST00000577898 77 ntBASIC4.52□□□□□ -1.69
CTDNEP1O95476 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 AC016252.1-201ENST00000609721 474 ntBASIC4.52□□□□□ -1.69
CTDNEP1O95476 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 AC015813.6-201ENST00000624409 5808 ntBASIC4.52□□□□□ -1.69
CTDNEP1O95476 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 AC000123.3-201ENST00000624029 4975 ntBASIC4.52□□□□□ -1.69
CTDNEP1O95476 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTDNEP1O95476 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CTDNEP1O95476 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CTDNEP1O95476 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CTDNEP1O95476 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
CTDNEP1O95476 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTDNEP1O95476 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CTDNEP1O95476 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.51□□□□□ -1.69
CTDNEP1O95476 AP002001.2-201ENST00000529025 1469 ntBASIC4.51□□□□□ -1.69
CTDNEP1O95476 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CTDNEP1O95476 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTDNEP1O95476 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTDNEP1O95476 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.51□□□□□ -1.69
CTDNEP1O95476 SNORA62-201ENST00000365493 153 ntBASIC4.51□□□□□ -1.69
CTDNEP1O95476 ATP5F1P2-201ENST00000398143 760 ntBASIC4.51□□□□□ -1.69
CTDNEP1O95476 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.51□□□□□ -1.69
CTDNEP1O95476 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.51□□□□□ -1.69
CTDNEP1O95476 SNRPFP2-201ENST00000440710 251 ntBASIC4.51□□□□□ -1.69
CTDNEP1O95476 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.51□□□□□ -1.69
CTDNEP1O95476 AC084198.1-201ENST00000477747 402 ntBASIC4.51□□□□□ -1.69
CTDNEP1O95476 RAC1P2-201ENST00000511164 579 ntBASIC4.51□□□□□ -1.69
CTDNEP1O95476 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
CTDNEP1O95476 NPM1P6-201ENST00000521088 871 ntBASIC4.51□□□□□ -1.69
CTDNEP1O95476 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.51□□□□□ -1.69
CTDNEP1O95476 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.51□□□□□ -1.69
CTDNEP1O95476 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.51□□□□□ -1.69
CTDNEP1O95476 ELOCP28-201ENST00000590044 317 ntBASIC4.51□□□□□ -1.69
CTDNEP1O95476 ATE1-AS1-202ENST00000636460 506 ntBASIC4.51□□□□□ -1.69
CTDNEP1O95476 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CTDNEP1O95476 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTDNEP1O95476 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.5□□□□□ -1.69
CTDNEP1O95476 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.5□□□□□ -1.69
CTDNEP1O95476 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CTDNEP1O95476 RN7SKP224-201ENST00000364140 325 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 RNU6-213P-201ENST00000384051 104 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 SNORA68.2-201ENST00000391263 128 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 SOD2P1-201ENST00000396543 562 ntBASIC4.5□□□□□ -1.69
CTDNEP1O95476 AL049693.1-201ENST00000402760 611 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms