Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 RPL5P2-201ENST00000429598 854 ntBASIC6.86□□□□□ -1.31
RAPGEF3O95398 AL445584.1-201ENST00000431451 330 ntBASIC6.86□□□□□ -1.31
RAPGEF3O95398 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 AL162151.2-201ENST00000448875 158 ntBASIC6.86□□□□□ -1.31
RAPGEF3O95398 RPL5P32-201ENST00000454085 879 ntBASIC6.86□□□□□ -1.31
RAPGEF3O95398 AC239798.3-201ENST00000454459 408 ntBASIC6.86□□□□□ -1.31
RAPGEF3O95398 VN1R105P-201ENST00000486595 910 ntBASIC6.86□□□□□ -1.31
RAPGEF3O95398 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 RNU6-1028P-201ENST00000517164 93 ntBASIC6.86□□□□□ -1.31
RAPGEF3O95398 OR4U1P-201ENST00000554958 912 ntBASIC6.86□□□□□ -1.31
RAPGEF3O95398 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 FAM106CP-201ENST00000582212 507 ntBASIC6.86□□□□□ -1.31
RAPGEF3O95398 DUXAP3-201ENST00000603616 594 ntBASIC6.86□□□□□ -1.31
RAPGEF3O95398 AL159169.2-201ENST00000610061 1269 ntBASIC6.86□□□□□ -1.31
RAPGEF3O95398 AC017104.5-201ENST00000637647 639 ntBASIC6.86□□□□□ -1.31
RAPGEF3O95398 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RAPGEF3O95398 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RAPGEF3O95398 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
RAPGEF3O95398 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
RAPGEF3O95398 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
RAPGEF3O95398 A2MP1-204ENST00000566278 4130 ntBASIC6.86□□□□□ -1.31
RAPGEF3O95398 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RAPGEF3O95398 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RAPGEF3O95398 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RAPGEF3O95398 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RAPGEF3O95398 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RAPGEF3O95398 SNORA9-201ENST00000384215 133 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 PVALB-202ENST00000404171 422 ntTSL 2 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 MTCO1P54-201ENST00000430139 712 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 AL035458.1-201ENST00000433096 585 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 CR769776.1-201ENST00000441254 787 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 RPL23AP43-201ENST00000446445 471 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 snoU13.24-201ENST00000458998 104 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 AC025164.1-201ENST00000496249 478 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 MTCYBP35-201ENST00000503630 1137 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RAPGEF3O95398 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 SNORA31.13-201ENST00000516624 135 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 LRRC6P1-201ENST00000532188 885 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 MTCYBP13-201ENST00000578634 1093 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 AC053481.4-201ENST00000583164 216 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 AC004223.2-201ENST00000590309 544 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RAPGEF3O95398 AF131215.7-201ENST00000602443 707 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 AC008739.3-201ENST00000603262 127 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 AP002906.1-201ENST00000603405 233 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 PART1_2.1-201ENST00000612397 250 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 AL162574.1-201ENST00000615702 950 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RAPGEF3O95398 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RAPGEF3O95398 AC011447.7-201ENST00000624228 1590 ntBASIC6.85□□□□□ -1.31
RAPGEF3O95398 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
RAPGEF3O95398 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
RAPGEF3O95398 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
RAPGEF3O95398 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RAPGEF3O95398 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.84□□□□□ -1.31
RAPGEF3O95398 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RAPGEF3O95398 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.84□□□□□ -1.31
RAPGEF3O95398 ZNF849P-201ENST00000594711 1566 ntBASIC6.84□□□□□ -1.31
RAPGEF3O95398 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RAPGEF3O95398 SNORA70.9-201ENST00000384370 135 ntBASIC6.84□□□□□ -1.31
RAPGEF3O95398 RPL7P27-201ENST00000403775 720 ntBASIC6.84□□□□□ -1.31
RAPGEF3O95398 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC6.84□□□□□ -1.31
RAPGEF3O95398 RPL22P18-201ENST00000417197 377 ntBASIC6.84□□□□□ -1.31
RAPGEF3O95398 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.84□□□□□ -1.31
RAPGEF3O95398 PTP4A1P1-201ENST00000420539 515 ntBASIC6.84□□□□□ -1.31
RAPGEF3O95398 YME1L1P1-201ENST00000429435 297 ntBASIC6.84□□□□□ -1.31
RAPGEF3O95398 AC018644.1-201ENST00000429934 551 ntBASIC6.84□□□□□ -1.31
RAPGEF3O95398 ETF1P3-201ENST00000430422 1160 ntBASIC6.84□□□□□ -1.31
RAPGEF3O95398 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.84□□□□□ -1.31
RAPGEF3O95398 RPL23AP52-201ENST00000439311 478 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms