Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS4BO75351 FTH1P2-201ENST00000466086 412 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS4BO75351 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.23□□□□□ -1.57
VPS4BO75351 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS4BO75351 AC072052.1-201ENST00000496556 306 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4BO75351 AC021146.8-201ENST00000507455 733 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 MTCYBP16-201ENST00000509187 1129 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 AC079395.1-201ENST00000510981 262 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 MTND6P2-201ENST00000512226 524 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS4BO75351 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4BO75351 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4BO75351 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4BO75351 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 AC022832.1-201ENST00000530718 645 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 OR5D15P-201ENST00000531671 942 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 OR8G3P-201ENST00000533406 921 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
VPS4BO75351 AC024909.2-201ENST00000553035 286 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS4BO75351 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS4BO75351 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4BO75351 AP005403.1-201ENST00000579720 229 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 MIR4646-201ENST00000580775 63 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 RN7SL356P-201ENST00000582228 248 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 AC009027.1-201ENST00000604510 479 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 AC090425.2-201ENST00000608818 501 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4BO75351 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS4BO75351 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.23□□□□□ -1.57
VPS4BO75351 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4BO75351 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS4BO75351 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS4BO75351 AC025263.3-201ENST00000622965 1396 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.23□□□□□ -1.57
VPS4BO75351 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4BO75351 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4BO75351 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4BO75351 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.23□□□□□ -1.57
VPS4BO75351 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4BO75351 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
VPS4BO75351 MRE11P1-201ENST00000464884 2127 ntBASIC5.23□□□□□ -1.57
VPS4BO75351 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.23□□□□□ -1.57
VPS4BO75351 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS4BO75351 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VPS4BO75351 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
VPS4BO75351 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS4BO75351 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS4BO75351 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS4BO75351 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS4BO75351 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VPS4BO75351 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VPS4BO75351 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
VPS4BO75351 AC008549.2-201ENST00000333482 706 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 Y_RNA.77-201ENST00000362962 107 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS4BO75351 MIR765-201ENST00000390226 114 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 SNORD65.1-201ENST00000390889 71 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 RNA5SP80-201ENST00000410475 111 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 RPL12P9-201ENST00000412942 488 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 BTF3L4P1-201ENST00000413813 468 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS4BO75351 AL133325.1-201ENST00000421090 382 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 AL133173.1-201ENST00000423458 397 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS4BO75351 ATP5F1P1-201ENST00000433775 569 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS4BO75351 CYCSP12-201ENST00000437729 300 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.22□□□□□ -1.57
VPS4BO75351 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS4BO75351 CYCSP24-201ENST00000445119 316 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 DNAJB5P1-201ENST00000454004 806 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 RFC5P1-201ENST00000454419 874 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 RPL35AP28-201ENST00000459730 331 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 AC092754.2-201ENST00000463506 460 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.22□□□□□ -1.57
VPS4BO75351 AC092754.1-201ENST00000472975 479 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 AL161747.1-201ENST00000480068 358 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS4BO75351 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS4BO75351 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VPS4BO75351 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS4BO75351 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS4BO75351 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS4BO75351 MTCO1P49-201ENST00000523429 802 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 AP000676.2-201ENST00000529711 301 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VPS4BO75351 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS4BO75351 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS4BO75351 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS4BO75351 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS4BO75351 AC079171.1-201ENST00000568788 914 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS4BO75351 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS4BO75351 ISCA1P3-201ENST00000577104 373 ntBASIC5.22□□□□□ -1.57
VPS4BO75351 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS4BO75351 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS4BO75351 VN1R82P-201ENST00000601481 356 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms