Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
PRKNO60260 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.72
PRKNO60260 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.33□□□□□ -1.72
PRKNO60260 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
PRKNO60260 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRKNO60260 AL121950.1-201ENST00000624993 2077 ntBASIC4.33□□□□□ -1.72
PRKNO60260 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PRKNO60260 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRKNO60260 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PRKNO60260 AC099786.3-201ENST00000565735 1410 ntBASIC4.33□□□□□ -1.72
PRKNO60260 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.33□□□□□ -1.72
PRKNO60260 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRKNO60260 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PRKNO60260 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PRKNO60260 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PRKNO60260 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PRKNO60260 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PRKNO60260 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PRKNO60260 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PRKNO60260 SNORD65C-201ENST00000390962 71 ntBASIC4.33□□□□□ -1.72
PRKNO60260 RNA5SP332-201ENST00000391063 115 ntBASIC4.33□□□□□ -1.72
PRKNO60260 GLULP6-201ENST00000399502 913 ntBASIC4.33□□□□□ -1.72
PRKNO60260 RPS27AP11-201ENST00000402798 447 ntBASIC4.33□□□□□ -1.72
PRKNO60260 AL080315.1-201ENST00000406055 466 ntBASIC4.33□□□□□ -1.72
PRKNO60260 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.33□□□□□ -1.72
PRKNO60260 RN7SKP97-201ENST00000410966 333 ntBASIC4.33□□□□□ -1.72
PRKNO60260 AC005005.2-201ENST00000420779 380 ntBASIC4.33□□□□□ -1.72
PRKNO60260 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.33□□□□□ -1.72
PRKNO60260 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.33□□□□□ -1.72
PRKNO60260 MTCO1P52-201ENST00000433928 531 ntBASIC4.33□□□□□ -1.72
PRKNO60260 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.33□□□□□ -1.72
PRKNO60260 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.33□□□□□ -1.72
PRKNO60260 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.33□□□□□ -1.72
PRKNO60260 NDUFA12P1-201ENST00000455914 406 ntBASIC4.33□□□□□ -1.72
PRKNO60260 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.33□□□□□ -1.72
PRKNO60260 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.33□□□□□ -1.72
PRKNO60260 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.33□□□□□ -1.72
PRKNO60260 AC134050.1-201ENST00000495088 933 ntBASIC4.33□□□□□ -1.72
PRKNO60260 RPL21P131-201ENST00000497298 483 ntBASIC4.33□□□□□ -1.72
PRKNO60260 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.33□□□□□ -1.72
PRKNO60260 AC010627.1-201ENST00000503819 1294 ntBASIC4.33□□□□□ -1.72
PRKNO60260 RNU6-513P-201ENST00000516104 104 ntBASIC4.33□□□□□ -1.72
PRKNO60260 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.33□□□□□ -1.72
PRKNO60260 AC018442.3-201ENST00000523025 183 ntBASIC4.33□□□□□ -1.72
PRKNO60260 OR8I1P-201ENST00000529291 931 ntBASIC4.33□□□□□ -1.72
PRKNO60260 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PRKNO60260 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.33□□□□□ -1.72
PRKNO60260 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.33□□□□□ -1.72
PRKNO60260 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRKNO60260 AC113368.1-201ENST00000603736 382 ntBASIC4.33□□□□□ -1.72
PRKNO60260 ELOCP35-201ENST00000604289 336 ntBASIC4.33□□□□□ -1.72
PRKNO60260 AL121890.2-201ENST00000617644 465 ntBASIC4.33□□□□□ -1.72
PRKNO60260 AL121890.3-201ENST00000618494 516 ntBASIC4.33□□□□□ -1.72
PRKNO60260 AL355493.4-201ENST00000618530 292 ntBASIC4.33□□□□□ -1.72
PRKNO60260 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.33□□□□□ -1.72
PRKNO60260 AC011330.2-201ENST00000621680 635 ntBASIC4.33□□□□□ -1.72
PRKNO60260 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.33□□□□□ -1.72
PRKNO60260 AC021106.3-201ENST00000623925 531 ntBASIC4.33□□□□□ -1.72
PRKNO60260 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRKNO60260 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.33□□□□□ -1.72
PRKNO60260 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
PRKNO60260 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PRKNO60260 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRKNO60260 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.33□□□□□ -1.72
PRKNO60260 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PRKNO60260 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.32□□□□□ -1.72
PRKNO60260 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PRKNO60260 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PRKNO60260 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.32□□□□□ -1.72
PRKNO60260 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PRKNO60260 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PRKNO60260 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.32□□□□□ -1.72
PRKNO60260 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.32□□□□□ -1.72
PRKNO60260 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PRKNO60260 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.32□□□□□ -1.72
PRKNO60260 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PRKNO60260 MIR659-201ENST00000384963 97 ntBASIC4.32□□□□□ -1.72
PRKNO60260 Y_RNA.578-201ENST00000390903 88 ntBASIC4.32□□□□□ -1.72
PRKNO60260 DNAJC19P6-201ENST00000401853 280 ntBASIC4.32□□□□□ -1.72
PRKNO60260 AL592291.1-201ENST00000403830 352 ntBASIC4.32□□□□□ -1.72
PRKNO60260 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PRKNO60260 RN7SKP267-201ENST00000410381 285 ntBASIC4.32□□□□□ -1.72
PRKNO60260 AC105402.1-201ENST00000413336 545 ntBASIC4.32□□□□□ -1.72
PRKNO60260 VTA1P1-201ENST00000414044 866 ntBASIC4.32□□□□□ -1.72
PRKNO60260 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.32□□□□□ -1.72
PRKNO60260 MTND4P3-201ENST00000417829 541 ntBASIC4.32□□□□□ -1.72
PRKNO60260 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PRKNO60260 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.32□□□□□ -1.72
PRKNO60260 H2AFZP5-201ENST00000446960 382 ntBASIC4.32□□□□□ -1.72
PRKNO60260 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.32□□□□□ -1.72
PRKNO60260 AL035407.2-201ENST00000454090 378 ntBASIC4.32□□□□□ -1.72
PRKNO60260 RPL7P32-201ENST00000457119 744 ntBASIC4.32□□□□□ -1.72
PRKNO60260 MTCO2P6-201ENST00000463134 685 ntBASIC4.32□□□□□ -1.72
PRKNO60260 AC090142.1-201ENST00000465776 462 ntBASIC4.32□□□□□ -1.72
PRKNO60260 OR52A4P-201ENST00000472867 958 ntBASIC4.32□□□□□ -1.72
PRKNO60260 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.32□□□□□ -1.72
PRKNO60260 AC023050.1-201ENST00000498198 304 ntBASIC4.32□□□□□ -1.72
PRKNO60260 AC111000.3-201ENST00000508057 576 ntBASIC4.32□□□□□ -1.72
PRKNO60260 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.32□□□□□ -1.72
PRKNO60260 AC008837.1-201ENST00000511513 412 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms