Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 OR5P1P-201ENST00000299512 925 ntBASIC3.82□□□□□ -1.8
SGCEO43556 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SGCEO43556 RNU1-15P-201ENST00000353977 144 ntBASIC3.82□□□□□ -1.8
SGCEO43556 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SGCEO43556 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SGCEO43556 RNA5SP332-201ENST00000391063 115 ntBASIC3.82□□□□□ -1.8
SGCEO43556 CYB5AP4-201ENST00000396692 399 ntBASIC3.82□□□□□ -1.8
SGCEO43556 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SGCEO43556 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.82□□□□□ -1.8
SGCEO43556 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.82□□□□□ -1.8
SGCEO43556 RNA5SP239-201ENST00000410218 129 ntBASIC3.82□□□□□ -1.8
SGCEO43556 TMSB10P2-201ENST00000416049 131 ntBASIC3.82□□□□□ -1.8
SGCEO43556 AL356387.2-201ENST00000422272 243 ntBASIC3.82□□□□□ -1.8
SGCEO43556 AC009965.2-201ENST00000425328 970 ntBASIC3.82□□□□□ -1.8
SGCEO43556 NPM1P24-201ENST00000428039 894 ntBASIC3.82□□□□□ -1.8
SGCEO43556 RPL23AP1-201ENST00000428990 471 ntBASIC3.82□□□□□ -1.8
SGCEO43556 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.82□□□□□ -1.8
SGCEO43556 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.82□□□□□ -1.8
SGCEO43556 RPEP2-201ENST00000432149 701 ntBASIC3.82□□□□□ -1.8
SGCEO43556 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.82□□□□□ -1.8
SGCEO43556 ELOCP18-201ENST00000434209 337 ntBASIC3.82□□□□□ -1.8
SGCEO43556 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.82□□□□□ -1.8
SGCEO43556 TXNP2-201ENST00000443918 295 ntBASIC3.82□□□□□ -1.8
SGCEO43556 AL157884.3-201ENST00000448273 1184 ntBASIC3.82□□□□□ -1.8
SGCEO43556 BUD31P2-201ENST00000449374 300 ntBASIC3.82□□□□□ -1.8
SGCEO43556 DHFRP3-201ENST00000455595 559 ntBASIC3.82□□□□□ -1.8
SGCEO43556 SEPT7P6-201ENST00000469999 1143 ntBASIC3.82□□□□□ -1.8
SGCEO43556 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.82□□□□□ -1.8
SGCEO43556 AC093720.1-201ENST00000505681 714 ntBASIC3.82□□□□□ -1.8
SGCEO43556 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.82□□□□□ -1.8
SGCEO43556 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.82□□□□□ -1.8
SGCEO43556 IGLVIV-65-201ENST00000517313 360 ntBASIC3.82□□□□□ -1.8
SGCEO43556 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.82□□□□□ -1.8
SGCEO43556 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SGCEO43556 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.82□□□□□ -1.8
SGCEO43556 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.82□□□□□ -1.8
SGCEO43556 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.82□□□□□ -1.8
SGCEO43556 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.82□□□□□ -1.8
SGCEO43556 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.82□□□□□ -1.8
SGCEO43556 FAM60CP-201ENST00000591086 664 ntBASIC3.82□□□□□ -1.8
SGCEO43556 VN1R79P-201ENST00000593540 513 ntBASIC3.82□□□□□ -1.8
SGCEO43556 AC005034.4-201ENST00000603612 899 ntBASIC3.82□□□□□ -1.8
SGCEO43556 AC123768.4-201ENST00000616244 701 ntBASIC3.82□□□□□ -1.8
SGCEO43556 AC073342.3-201ENST00000624211 193 ntBASIC3.82□□□□□ -1.8
SGCEO43556 FP325313.1-201ENST00000638228 703 ntBASIC3.82□□□□□ -1.8
SGCEO43556 AC025031.4-201ENST00000621248 3271 ntBASIC3.82□□□□□ -1.8
SGCEO43556 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
SGCEO43556 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SGCEO43556 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
SGCEO43556 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
SGCEO43556 FAM35DP-201ENST00000323387 2712 ntBASIC3.81□□□□□ -1.8
SGCEO43556 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SGCEO43556 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SGCEO43556 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SGCEO43556 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
SGCEO43556 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SGCEO43556 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SGCEO43556 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SGCEO43556 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.81□□□□□ -1.8
SGCEO43556 AC008033.1-201ENST00000216407 1162 ntBASIC3.81□□□□□ -1.8
SGCEO43556 AC240504.1-201ENST00000395709 845 ntBASIC3.81□□□□□ -1.8
SGCEO43556 RPL31P52-201ENST00000407532 367 ntBASIC3.81□□□□□ -1.8
SGCEO43556 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SGCEO43556 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.81□□□□□ -1.8
SGCEO43556 EIF1P3-201ENST00000423841 334 ntBASIC3.81□□□□□ -1.8
SGCEO43556 AC234779.1-201ENST00000425910 285 ntBASIC3.81□□□□□ -1.8
SGCEO43556 RPL7P4-203ENST00000430239 730 ntBASIC3.81□□□□□ -1.8
SGCEO43556 RPL31P20-201ENST00000449593 360 ntBASIC3.81□□□□□ -1.8
SGCEO43556 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.81□□□□□ -1.8
SGCEO43556 AC005229.2-201ENST00000456995 399 ntBASIC3.81□□□□□ -1.8
SGCEO43556 RPL35AP15-201ENST00000468042 339 ntBASIC3.81□□□□□ -1.8
SGCEO43556 AC007686.1-201ENST00000488511 463 ntBASIC3.81□□□□□ -1.8
SGCEO43556 AC006499.6-201ENST00000511169 607 ntBASIC3.81□□□□□ -1.8
SGCEO43556 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SGCEO43556 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.81□□□□□ -1.8
SGCEO43556 PHBP17-201ENST00000528576 541 ntBASIC3.81□□□□□ -1.8
SGCEO43556 OR5BC1P-201ENST00000529327 739 ntBASIC3.81□□□□□ -1.8
SGCEO43556 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.81□□□□□ -1.8
SGCEO43556 AC091515.1-201ENST00000548110 679 ntBASIC3.81□□□□□ -1.8
SGCEO43556 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.81□□□□□ -1.8
SGCEO43556 AC137768.1-201ENST00000549998 553 ntBASIC3.81□□□□□ -1.8
SGCEO43556 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.81□□□□□ -1.8
SGCEO43556 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.81□□□□□ -1.8
SGCEO43556 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.81□□□□□ -1.8
SGCEO43556 AGGF1P8-201ENST00000562979 1000 ntBASIC3.81□□□□□ -1.8
SGCEO43556 AC009101.1-201ENST00000568135 242 ntBASIC3.81□□□□□ -1.8
SGCEO43556 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.81□□□□□ -1.8
SGCEO43556 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.81□□□□□ -1.8
SGCEO43556 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.81□□□□□ -1.8
SGCEO43556 MIR4443-201ENST00000585052 53 ntBASIC3.81□□□□□ -1.8
SGCEO43556 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.81□□□□□ -1.8
SGCEO43556 AC010680.3-201ENST00000604215 520 ntBASIC3.81□□□□□ -1.8
SGCEO43556 AL049844.2-201ENST00000604280 628 ntBASIC3.81□□□□□ -1.8
SGCEO43556 HMGB1P50-201ENST00000605814 607 ntBASIC3.81□□□□□ -1.8
SGCEO43556 AC019193.2-201ENST00000610012 634 ntBASIC3.81□□□□□ -1.8
SGCEO43556 AC016957.2-201ENST00000616998 848 ntBASIC3.81□□□□□ -1.8
SGCEO43556 MIR7703-201ENST00000620784 77 ntBASIC3.81□□□□□ -1.8
SGCEO43556 AP003497.2-201ENST00000624220 967 ntBASIC3.81□□□□□ -1.8
SGCEO43556 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.81□□□□□ -1.8
SGCEO43556 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms