Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RNU6-564P-201ENST00000410983 104 ntBASIC4.22□□□□□ -1.73
LSM1O15116 RPS23P10-201ENST00000416185 486 ntBASIC4.22□□□□□ -1.73
LSM1O15116 AC115285.1-201ENST00000424879 736 ntBASIC4.22□□□□□ -1.73
LSM1O15116 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LSM1O15116 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.22□□□□□ -1.73
LSM1O15116 AC114495.1-201ENST00000441274 436 ntBASIC4.22□□□□□ -1.73
LSM1O15116 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.22□□□□□ -1.73
LSM1O15116 CEACAMP6-201ENST00000452007 574 ntBASIC4.22□□□□□ -1.73
LSM1O15116 SNRPGP5-201ENST00000456003 220 ntBASIC4.22□□□□□ -1.73
LSM1O15116 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.22□□□□□ -1.73
LSM1O15116 AP000827.1-201ENST00000527814 258 ntBASIC4.22□□□□□ -1.73
LSM1O15116 AC044860.2-201ENST00000561005 179 ntBASIC4.22□□□□□ -1.73
LSM1O15116 CYP4A43P-201ENST00000568156 121 ntBASIC4.22□□□□□ -1.73
LSM1O15116 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.22□□□□□ -1.73
LSM1O15116 AC020915.5-201ENST00000596836 964 ntBASIC4.22□□□□□ -1.73
LSM1O15116 AP004372.1-201ENST00000604842 844 ntBASIC4.22□□□□□ -1.73
LSM1O15116 AC211433.2-201ENST00000608433 387 ntBASIC4.22□□□□□ -1.73
LSM1O15116 AL096803.3-201ENST00000609032 532 ntBASIC4.22□□□□□ -1.73
LSM1O15116 AL031666.3-201ENST00000609320 1006 ntBASIC4.22□□□□□ -1.73
LSM1O15116 AC100847.1-201ENST00000611316 481 ntBASIC4.22□□□□□ -1.73
LSM1O15116 AC123768.4-201ENST00000616244 701 ntBASIC4.22□□□□□ -1.73
LSM1O15116 uc_338.9-201ENST00000617424 182 ntBASIC4.22□□□□□ -1.73
LSM1O15116 AC019278.1-201ENST00000623516 479 ntBASIC4.22□□□□□ -1.73
LSM1O15116 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.22□□□□□ -1.73
LSM1O15116 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LSM1O15116 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LSM1O15116 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LSM1O15116 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.22□□□□□ -1.73
LSM1O15116 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LSM1O15116 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LSM1O15116 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LSM1O15116 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LSM1O15116 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LSM1O15116 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LSM1O15116 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
LSM1O15116 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
LSM1O15116 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
LSM1O15116 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.21□□□□□ -1.73
LSM1O15116 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LSM1O15116 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LSM1O15116 RNU4-23P-201ENST00000362839 140 ntBASIC4.21□□□□□ -1.74
LSM1O15116 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.21□□□□□ -1.74
LSM1O15116 SNORA70F-201ENST00000384142 135 ntBASIC4.21□□□□□ -1.74
LSM1O15116 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.21□□□□□ -1.74
LSM1O15116 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.21□□□□□ -1.74
LSM1O15116 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.21□□□□□ -1.74
LSM1O15116 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.21□□□□□ -1.74
LSM1O15116 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.21□□□□□ -1.74
LSM1O15116 BMS1P19-201ENST00000433925 393 ntBASIC4.21□□□□□ -1.74
LSM1O15116 AL359265.2-201ENST00000434367 631 ntBASIC4.21□□□□□ -1.74
LSM1O15116 AC110749.1-201ENST00000462007 357 ntBASIC4.21□□□□□ -1.74
LSM1O15116 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.21□□□□□ -1.74
LSM1O15116 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
LSM1O15116 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.21□□□□□ -1.74
LSM1O15116 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.21□□□□□ -1.74
LSM1O15116 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.21□□□□□ -1.74
LSM1O15116 OR5AN2P-201ENST00000534535 896 ntBASIC4.21□□□□□ -1.74
LSM1O15116 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.21□□□□□ -1.74
LSM1O15116 NPM1P47-201ENST00000560843 856 ntBASIC4.21□□□□□ -1.74
LSM1O15116 AC141257.3-201ENST00000572906 215 ntBASIC4.21□□□□□ -1.74
LSM1O15116 MIR4458-201ENST00000578872 75 ntBASIC4.21□□□□□ -1.74
LSM1O15116 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
LSM1O15116 SS18L2P2-201ENST00000583960 235 ntBASIC4.21□□□□□ -1.74
LSM1O15116 AL133243.1-201ENST00000614487 366 ntBASIC4.21□□□□□ -1.74
LSM1O15116 AL391597.1-201ENST00000618707 694 ntBASIC4.21□□□□□ -1.74
LSM1O15116 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LSM1O15116 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LSM1O15116 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.21□□□□□ -1.74
LSM1O15116 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.21□□□□□ -1.74
LSM1O15116 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LSM1O15116 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LSM1O15116 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LSM1O15116 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.74
LSM1O15116 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.2□□□□□ -1.74
LSM1O15116 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
LSM1O15116 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LSM1O15116 AC066616.2-201ENST00000559334 1481 ntBASIC4.2□□□□□ -1.74
LSM1O15116 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LSM1O15116 SNORD113.2-201ENST00000364166 89 ntBASIC4.2□□□□□ -1.74
LSM1O15116 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LSM1O15116 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LSM1O15116 MIR3065-201ENST00000390137 79 ntBASIC4.2□□□□□ -1.74
LSM1O15116 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.2□□□□□ -1.74
LSM1O15116 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LSM1O15116 RPL23AP26-201ENST00000412728 464 ntBASIC4.2□□□□□ -1.74
LSM1O15116 JKAMPP1-201ENST00000413804 919 ntBASIC4.2□□□□□ -1.74
LSM1O15116 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.2□□□□□ -1.74
LSM1O15116 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.2□□□□□ -1.74
LSM1O15116 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.2□□□□□ -1.74
LSM1O15116 AL159169.1-201ENST00000421119 127 ntBASIC4.2□□□□□ -1.74
LSM1O15116 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.2□□□□□ -1.74
LSM1O15116 ELOCP18-201ENST00000434209 337 ntBASIC4.2□□□□□ -1.74
LSM1O15116 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.2□□□□□ -1.74
LSM1O15116 GSTA7P-201ENST00000438425 448 ntBASIC4.2□□□□□ -1.74
LSM1O15116 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.2□□□□□ -1.74
LSM1O15116 AL353898.1-201ENST00000444055 238 ntBASIC4.2□□□□□ -1.74
LSM1O15116 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.2□□□□□ -1.74
LSM1O15116 ANP32BP2-201ENST00000454525 545 ntBASIC4.2□□□□□ -1.74
LSM1O15116 AC010326.1-201ENST00000462726 602 ntBASIC4.2□□□□□ -1.74
LSM1O15116 AC104629.2-201ENST00000468627 598 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms