Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.3□□□□□ -1.72
PDLIM1O00151 AC017083.1-201ENST00000428093 483 ntBASIC4.3□□□□□ -1.72
PDLIM1O00151 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.3□□□□□ -1.72
PDLIM1O00151 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.3□□□□□ -1.72
PDLIM1O00151 IFNWP4-201ENST00000453148 294 ntBASIC4.3□□□□□ -1.72
PDLIM1O00151 AURKAPS2-201ENST00000454983 333 ntBASIC4.3□□□□□ -1.72
PDLIM1O00151 SNRPGP5-201ENST00000456003 220 ntBASIC4.3□□□□□ -1.72
PDLIM1O00151 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.3□□□□□ -1.72
PDLIM1O00151 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.3□□□□□ -1.72
PDLIM1O00151 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.3□□□□□ -1.72
PDLIM1O00151 AC108471.1-201ENST00000513977 287 ntBASIC4.3□□□□□ -1.72
PDLIM1O00151 SETP12-201ENST00000514068 805 ntBASIC4.3□□□□□ -1.72
PDLIM1O00151 MIR5699-201ENST00000578903 90 ntBASIC4.3□□□□□ -1.72
PDLIM1O00151 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
PDLIM1O00151 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.3□□□□□ -1.72
PDLIM1O00151 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.3□□□□□ -1.72
PDLIM1O00151 AC007497.1-201ENST00000610421 561 ntBASIC4.3□□□□□ -1.72
PDLIM1O00151 AC119674.1-212ENST00000641155 993 ntBASIC4.3□□□□□ -1.72
PDLIM1O00151 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PDLIM1O00151 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PDLIM1O00151 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDLIM1O00151 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM1O00151 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM1O00151 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.29□□□□□ -1.72
PDLIM1O00151 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM1O00151 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM1O00151 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PDLIM1O00151 RNU6-532P-201ENST00000384318 107 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM1O00151 MIR937-201ENST00000401271 86 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 RNA5SP113-201ENST00000410486 84 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 OR51B3P-201ENST00000412287 913 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 AC019050.1-201ENST00000418508 492 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 CENPIP1-201ENST00000425713 902 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM1O00151 RPL12P28-201ENST00000430852 489 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM1O00151 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM1O00151 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM1O00151 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.29□□□□□ -1.72
PDLIM1O00151 ANP32BP2-201ENST00000454525 545 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 RPL7AP52-201ENST00000458096 790 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 AC092691.2-201ENST00000461787 803 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM1O00151 AC093663.2-201ENST00000484625 313 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 AC105233.1-201ENST00000498840 781 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.29□□□□□ -1.72
PDLIM1O00151 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM1O00151 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM1O00151 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.29□□□□□ -1.72
PDLIM1O00151 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM1O00151 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM1O00151 AC027176.2-201ENST00000559166 746 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 RN7SL802P-201ENST00000577858 299 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM1O00151 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM1O00151 PSMA6P4-201ENST00000603247 718 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 AL031320.1-201ENST00000604177 357 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 AL391358.1-201ENST00000605342 190 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 AC073137.1-201ENST00000605636 634 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.29□□□□□ -1.72
PDLIM1O00151 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM1O00151 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM1O00151 AL138721.1-201ENST00000616756 179 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 AC091953.3-201ENST00000623220 236 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 AP003497.2-201ENST00000624220 967 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.29□□□□□ -1.72
PDLIM1O00151 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM1O00151 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM1O00151 AL445437.1-201ENST00000623157 3087 ntBASIC4.29□□□□□ -1.72
PDLIM1O00151 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM1O00151 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM1O00151 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.28□□□□□ -1.72
PDLIM1O00151 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PDLIM1O00151 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PDLIM1O00151 MAPK10-372ENST00000641954 3413 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PDLIM1O00151 RNU6-666P-201ENST00000363499 107 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 RNU1-44P-201ENST00000384453 163 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 RNU6-244P-201ENST00000391028 104 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 RN7SKP100-201ENST00000411258 284 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 AC114755.2-201ENST00000413520 361 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 AC048351.1-201ENST00000420064 602 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 SEC63P1-201ENST00000425785 1258 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.28□□□□□ -1.72
PDLIM1O00151 AC079168.2-201ENST00000453977 416 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 RNU7-170P-201ENST00000459303 61 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.28□□□□□ -1.72
PDLIM1O00151 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM1O00151 AC091868.1-201ENST00000508746 304 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
PDLIM1O00151 AC109458.1-201ENST00000508858 316 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 AC108120.2-201ENST00000512973 294 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.28□□□□□ -1.72
PDLIM1O00151 SMARCE1P4-201ENST00000523647 241 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.28□□□□□ -1.72
PDLIM1O00151 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.28□□□□□ -1.72
PDLIM1O00151 OR4C2P-201ENST00000530855 1064 ntBASIC4.28□□□□□ -1.72
PDLIM1O00151 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.28□□□□□ -1.72
PDLIM1O00151 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms