Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RN7SL442P-201ENST00000473804 320 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AC108860.1-201ENST00000484521 383 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AC006499.3-201ENST00000506077 748 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AC138866.2-201ENST00000508650 584 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 RNA5SP380-201ENST00000517190 98 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AC092747.2-201ENST00000545069 983 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AC068305.2-201ENST00000550567 1205 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 RN7SL652P-201ENST00000577769 300 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 MIR4505-201ENST00000582238 73 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 MIR4506-201ENST00000584693 77 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AC020910.3-201ENST00000603701 874 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AL451044.1-201ENST00000604867 238 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AP003117.2-201ENST00000606010 545 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AP000864.1-201ENST00000609424 650 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 WWOX-217ENST00000620008 450 ntTSL 2 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AC095038.2-201ENST00000621464 1070 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 AC016542.2-201ENST00000624201 619 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 FAM35CP-201ENST00000554755 2470 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 THAP12P4-201ENST00000528321 2266 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 API5P2-201ENST00000397055 1498 ntBASIC2.2□□□□□ -2.06
CHKB-CPT1BH3BT56 SLC9B1P1-201ENST00000331172 1337 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC117529.2-201ENST00000512159 2068 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 MTND5P7-201ENST00000413558 1798 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC021146.4-201ENST00000309229 279 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 SNORA74A-201ENST00000364089 198 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 MIR27A-201ENST00000385073 78 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 IL6-206ENST00000407492 926 ntTSL 3 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 OR3A2-201ENST00000408891 1076 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AL390774.1-201ENST00000411924 246 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AL596448.1-201ENST00000415024 392 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 BMS1P13-201ENST00000417301 885 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC092646.1-201ENST00000427142 901 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 VDAC1P6-201ENST00000430062 855 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 OR2B8P-201ENST00000432841 938 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AL512326.1-201ENST00000443050 721 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC005229.2-201ENST00000456995 399 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC097484.1-201ENST00000471148 389 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC087312.1-201ENST00000471411 480 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC079841.1-201ENST00000481228 950 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 RPSAP50-201ENST00000481955 852 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC023050.1-201ENST00000498198 304 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 TRAPPC2P2-201ENST00000517589 409 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 IGKV1-32-201ENST00000519290 311 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC095055.1-201ENST00000603472 1113 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC091488.1-201ENST00000604239 660 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 GMCL1P2-201ENST00000605230 823 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 BRDTP1-201ENST00000605735 677 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC005828.7-201ENST00000607331 556 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms