Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.2□□□□□ -1.74
NPIPA2E9PIF3 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NPIPA2E9PIF3 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.2□□□□□ -1.74
NPIPA2E9PIF3 AC005520.3-201ENST00000602874 370 ntBASIC4.2□□□□□ -1.74
NPIPA2E9PIF3 AL356218.2-201ENST00000605264 187 ntBASIC4.2□□□□□ -1.74
NPIPA2E9PIF3 AL355816.1-201ENST00000607951 118 ntBASIC4.2□□□□□ -1.74
NPIPA2E9PIF3 MIR1264-201ENST00000616374 69 ntBASIC4.2□□□□□ -1.74
NPIPA2E9PIF3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.2□□□□□ -1.74
NPIPA2E9PIF3 AP006248.3-201ENST00000623580 594 ntBASIC4.2□□□□□ -1.74
NPIPA2E9PIF3 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.2□□□□□ -1.74
NPIPA2E9PIF3 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.2□□□□□ -1.74
NPIPA2E9PIF3 OR2L1P-202ENST00000641567 1023 ntBASIC4.2□□□□□ -1.74
NPIPA2E9PIF3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPIPA2E9PIF3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPIPA2E9PIF3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.2□□□□□ -1.74
NPIPA2E9PIF3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
NPIPA2E9PIF3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPIPA2E9PIF3 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.2□□□□□ -1.74
NPIPA2E9PIF3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AL049693.1-201ENST00000402760 611 ntBASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AL592291.1-201ENST00000403830 352 ntBASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AL450992.3-201ENST00000413192 568 ntBASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AC006326.1-201ENST00000445465 787 ntBASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AC104651.2-201ENST00000447549 528 ntBASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AC010683.1-201ENST00000473673 378 ntBASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 SYT14P1-201ENST00000481459 721 ntBASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AC098799.3-201ENST00000506095 438 ntBASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 VWA8P1-201ENST00000510889 176 ntBASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 PARP1P2-201ENST00000556806 195 ntBASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AC084783.1-201ENST00000565846 910 ntBASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AC233266.2-201ENST00000567067 528 ntBASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AL133243.1-201ENST00000614487 366 ntBASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AP005019.3-201ENST00000620418 560 ntBASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AC015871.5-202ENST00000623252 701 ntBASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AC024023.1-201ENST00000624530 922 ntBASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AL356094.1-201ENST00000624663 1212 ntBASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPIPA2E9PIF3 AC126323.6-202ENST00000568092 3511 ntBASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 AC006042.3-201ENST00000454684 1469 ntBASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 RNU1-94P-201ENST00000362627 173 ntBASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 ARL4AP5-201ENST00000404372 599 ntBASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 AC019070.1-201ENST00000415008 1024 ntBASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 EIF4A1P1-201ENST00000420241 934 ntBASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 MORF4L1P7-201ENST00000426038 703 ntBASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 AL732292.1-201ENST00000426692 226 ntBASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 RPS6P12-201ENST00000432491 726 ntBASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 PTP4A1P3-201ENST00000433661 420 ntBASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 EEF1A1P1-201ENST00000447052 739 ntBASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 MTND2P30-201ENST00000456663 382 ntBASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 FTH1P2-201ENST00000466086 412 ntBASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 RPL36AP41-201ENST00000493820 306 ntBASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 AC025768.1-201ENST00000510057 267 ntBASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 RN7SKP141-201ENST00000516167 338 ntBASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.18□□□□□ -1.74
NPIPA2E9PIF3 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms