Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RPL23AP81-201ENST00000455252 467 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AC013356.1-201ENST00000489027 564 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 RPL35P6-201ENST00000490024 372 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AC104164.2-201ENST00000496953 495 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AC108145.1-201ENST00000503770 153 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 RNU6-943P-201ENST00000516960 98 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AC010476.1-201ENST00000519111 851 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 OR8G5-201ENST00000524943 1041 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AL356218.2-201ENST00000605264 187 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 BX323046.1-201ENST00000610145 535 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 AC007529.1-201ENST00000418574 2178 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 BDP1P-201ENST00000582658 1990 ntBASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DRB4X5D2U9 ZNF962P-201ENST00000443465 3140 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 OR4K17-201ENST00000315543 1032 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 RNA5SP239-201ENST00000410218 129 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 P2RY10P2-201ENST00000416730 913 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 AC009480.2-201ENST00000422916 432 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 RPS29P17-201ENST00000430795 166 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 ATP5HP2-201ENST00000433885 485 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 MTND2P2-201ENST00000434633 945 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 CLIC4P1-201ENST00000453177 535 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 MTND6P32-201ENST00000457611 483 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 RPS27AP16-201ENST00000492222 470 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 AC025554.1-201ENST00000505641 188 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 CBX3P5-201ENST00000552017 521 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 AC123786.2-201ENST00000603459 275 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 AL354984.3-201ENST00000604803 325 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 AP003392.5-201ENST00000607857 415 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 AC004241.3-201ENST00000611728 517 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 FAM27D1-201ENST00000612308 341 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 uc_338.32-201ENST00000615087 172 ntBASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HLA-DRB4X5D2U9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC139713.2-214ENST00000642059 1811 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC095050.2-201ENST00000510748 1458 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AL445437.1-201ENST00000623157 3087 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC010329.2-201ENST00000595195 2737 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 RNA5SP509-201ENST00000364577 119 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 RNU6-146P-201ENST00000384602 108 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AL035696.2-201ENST00000407941 709 ntBASIC3.16□□□□□ -1.9
HLA-DRB4X5D2U9 AC011933.1-201ENST00000413334 321 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms