Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AC005005.4-201ENST00000623789 16698 ntBASIC5.39□□□□□ -1.55
PCDHGA6Q9Y5G7 AC006484.1-201ENST00000435086 1884 ntBASIC5.39□□□□□ -1.55
PCDHGA6Q9Y5G7 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 RN7SKP145-201ENST00000363291 303 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 RNU6-178P-201ENST00000384631 104 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 SPTLC1P2-201ENST00000407089 121 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC068533.2-201ENST00000411872 306 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC211486.3-201ENST00000412694 621 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 VTI1BP4-201ENST00000427516 527 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC023347.2-201ENST00000433994 462 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 GSTA7P-201ENST00000438425 448 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC073648.4-201ENST00000442655 781 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 RNU1-88P-201ENST00000459274 128 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC100832.1-201ENST00000471945 383 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC013828.1-201ENST00000481845 158 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC091435.1-201ENST00000505442 584 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 RFPL4AP5-201ENST00000514977 504 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC096996.1-201ENST00000563813 325 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 ACTR3BP3-201ENST00000565577 979 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 MIR3915-201ENST00000578518 97 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC018714.1-201ENST00000605028 208 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC135507.1-201ENST00000607214 561 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC116651.1-201ENST00000609724 556 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 AC016769.4-201ENST00000616893 535 ntBASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA6Q9Y5G7 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 MRRFP1-201ENST00000435941 1675 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 STX3-208ENST00000641815 3236 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 AC004158.1-201ENST00000564508 4319 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 AC107081.3-201ENST00000612715 2034 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 AL451142.2-201ENST00000429076 2090 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 RNU1-19P-201ENST00000363306 165 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 Y_RNA.560-201ENST00000384689 102 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 RNA5SP91-201ENST00000390902 119 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 AC009804.1-201ENST00000400949 179 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 AC073264.1-201ENST00000411508 416 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 USP9YP33-201ENST00000412220 421 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 Z99497.1-201ENST00000421282 135 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 AC009237.2-201ENST00000421358 284 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 AL133173.1-201ENST00000423458 397 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 RPP40P1-201ENST00000426762 456 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 AL353597.2-202ENST00000434901 373 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 USP9YP35-201ENST00000435696 412 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 AC129850.1-201ENST00000436203 508 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 RPL5P25-201ENST00000441148 775 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 MTCO2P7-201ENST00000446518 666 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 OR7E116P-201ENST00000448529 957 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 AL450023.1-201ENST00000450868 751 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 USP9YP10-201ENST00000454868 628 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 RN7SL515P-201ENST00000463999 297 ntBASIC5.37□□□□□ -1.55
PCDHGA6Q9Y5G7 AC010301.1-201ENST00000473936 355 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms