Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 AC006484.1-201ENST00000435086 1884 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 RN7SKP33-201ENST00000410942 340 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 OR2AT2P-201ENST00000413438 905 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 RPS27AP6-201ENST00000427962 448 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 SKP1P3-201ENST00000429280 487 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 RPS24P8-201ENST00000431490 402 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 UBE2FP3-201ENST00000436366 524 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 AC002504.1-201ENST00000438281 691 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 UBE2V1P5-201ENST00000440070 405 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 AC092809.1-201ENST00000441469 474 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 RPS7P5-201ENST00000441482 581 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 TCEA1P3-201ENST00000443005 880 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 AL161747.1-201ENST00000480068 358 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 RN7SL273P-201ENST00000481561 299 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 RPL7P38-201ENST00000488396 739 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 MTND2P33-201ENST00000506452 1031 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 GLUD1P3-202ENST00000508551 200 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 AC137627.1-201ENST00000545761 289 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 SULT1C2P2-201ENST00000562517 294 ntBASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PPARGC1AQ9UBK2 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AC012020.1-201ENST00000624541 1728 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 TMSB4XP4-201ENST00000323496 618 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 SNORA5.1-201ENST00000384275 131 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 OR6C69P-201ENST00000394268 893 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 GAPDHP42-201ENST00000406848 981 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 RPS6P23-201ENST00000413224 722 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AC004448.2-201ENST00000422360 586 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 VTI1BP4-201ENST00000427516 527 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AC010975.2-201ENST00000427781 588 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 MED28P3-201ENST00000444288 531 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AL161636.2-201ENST00000445179 927 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AL450996.1-201ENST00000445574 1202 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AC023271.1-201ENST00000445936 1090 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 BNIP3P41-201ENST00000503774 571 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 DUTP7-201ENST00000507982 486 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 HMGB1P44-201ENST00000508597 572 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 IMPA1P1-201ENST00000510718 842 ntBASIC5.82□□□□□ -1.48
PPARGC1AQ9UBK2 NRON-201ENST00000517270 370 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms