Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AC025918.2-201ENST00000558683 763 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AL158211.1-201ENST00000566763 763 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AC016839.1-201ENST00000578162 867 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AC025175.1-201ENST00000606482 759 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AL359715.4-201ENST00000606629 1436 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AP001033.2-201ENST00000609701 1003 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SIX2Q9NPC8 SNX18P1Y-201ENST00000616231 511 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AP000346.3-201ENST00000622821 210 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AC090506.2-201ENST00000624521 419 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 AC099654.8-201ENST00000637757 681 ntBASIC4.59□□□□□ -1.67
SIX2Q9NPC8 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
SIX2Q9NPC8 MAPK10-253ENST00000641010 4072 ntBASIC4.59□□□□□ -1.68
SIX2Q9NPC8 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.59□□□□□ -1.68
SIX2Q9NPC8 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SIX2Q9NPC8 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 DDX18P6-201ENST00000450119 1997 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 RN7SKP235-201ENST00000410662 305 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 RPL12P28-201ENST00000430852 489 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 BX119904.1-201ENST00000432026 348 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AL772161.1-201ENST00000439130 476 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AL606517.1-201ENST00000446914 387 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 RPL23AP81-201ENST00000455252 467 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 MTND2P28-201ENST00000457540 1044 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 RPL7AP28-201ENST00000464513 571 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AC108729.1-201ENST00000487812 947 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AC025554.1-201ENST00000505641 188 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 RNA5SP360-201ENST00000516555 118 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 RNA5SP73-201ENST00000516744 108 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AC234771.5-201ENST00000600161 514 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 MTCO2P22-201ENST00000603246 681 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AC079880.2-201ENST00000603790 1213 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AC026741.1-201ENST00000605892 482 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AC008785.1-201ENST00000624475 456 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AC099654.9-201ENST00000637055 678 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 ZNF90P1-201ENST00000480493 1951 ntBASIC4.58□□□□□ -1.68
SIX2Q9NPC8 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX2Q9NPC8 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AL158163.1-201ENST00000603915 1649 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AL645568.2-201ENST00000432815 1337 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 RNA5SP447-201ENST00000363749 119 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 SNORA37-201ENST00000384504 129 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 RNA5SP36-201ENST00000410197 133 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 OR6C64P-201ENST00000419708 825 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SIX2Q9NPC8 EIF1P3-201ENST00000423841 334 ntBASIC4.57□□□□□ -1.68
SIX2Q9NPC8 VN1R42P-201ENST00000424651 344 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms