Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AP003717.3-201ENST00000544832 1180 ntBASIC4.77□□□□□ -1.65
PCDH9Q9HC56 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDH9Q9HC56 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDH9Q9HC56 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDH9Q9HC56 AC105129.1-201ENST00000560250 297 ntBASIC4.77□□□□□ -1.65
PCDH9Q9HC56 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDH9Q9HC56 RN7SL52P-201ENST00000584271 284 ntBASIC4.77□□□□□ -1.65
PCDH9Q9HC56 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDH9Q9HC56 Mico1.1-201ENST00000611698 204 ntBASIC4.77□□□□□ -1.65
PCDH9Q9HC56 AC140725.3-201ENST00000616193 880 ntBASIC4.77□□□□□ -1.65
PCDH9Q9HC56 CYCSP41-201ENST00000616920 296 ntBASIC4.77□□□□□ -1.65
PCDH9Q9HC56 MIR6853-201ENST00000619642 74 ntBASIC4.77□□□□□ -1.65
PCDH9Q9HC56 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDH9Q9HC56 AC083865.1-201ENST00000636634 831 ntBASIC4.77□□□□□ -1.65
PCDH9Q9HC56 AC135352.1-201ENST00000506173 1418 ntBASIC4.77□□□□□ -1.65
PCDH9Q9HC56 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDH9Q9HC56 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
PCDH9Q9HC56 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDH9Q9HC56 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDH9Q9HC56 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDH9Q9HC56 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDH9Q9HC56 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDH9Q9HC56 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDH9Q9HC56 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDH9Q9HC56 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 RN7SKP115-201ENST00000363177 317 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AL035419.1-201ENST00000397037 564 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC009302.1-201ENST00000417147 390 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC023128.2-201ENST00000420880 1223 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC016831.4-201ENST00000438302 307 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC006466.1-201ENST00000438721 289 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AL096803.2-201ENST00000450032 677 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 CALM1P2-201ENST00000452941 448 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 RPS6P2-201ENST00000454208 705 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC008280.2-201ENST00000455473 307 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 RPS20P4-201ENST00000461659 355 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC098862.1-201ENST00000504991 413 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC098799.3-201ENST00000506095 438 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 RNU2-30P-201ENST00000516209 141 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 snoU109.6-201ENST00000516831 118 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC091163.3-201ENST00000518269 1144 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 MTCYBP23-201ENST00000558717 1102 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC005332.5-201ENST00000591222 2919 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 BNIP3P38-201ENST00000601117 544 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 CLIC4P2-201ENST00000601934 717 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC098935.2-201ENST00000604222 466 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC133552.5-201ENST00000604266 540 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 Z82195.1-201ENST00000604558 398 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC008966.2-201ENST00000606157 453 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC131238.1-201ENST00000617135 328 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AL669942.2-201ENST00000620352 697 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 AC000123.3-201ENST00000624029 4975 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 CASC19-204ENST00000641001 2055 ntBASIC4.76□□□□□ -1.65
PCDH9Q9HC56 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PCDH9Q9HC56 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 RNU4-7P-201ENST00000364758 141 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 HDGFP1-201ENST00000405943 252 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 NCSTNP1-201ENST00000406229 144 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 UBE2V1P11-201ENST00000411559 285 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AL139128.1-201ENST00000413921 941 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.75□□□□□ -1.65
PCDH9Q9HC56 AC092447.2-201ENST00000435487 669 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms