Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 Z73965.1-201ENST00000623412 2297 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 MIR1179-201ENST00000408703 91 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 RN7SKP27-201ENST00000410684 333 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 MTATP6P19-201ENST00000413797 659 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AC004552.1-201ENST00000419089 348 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 CHIAP3-201ENST00000423668 1133 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 RPS26P47-201ENST00000427219 348 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 CBX1P1-201ENST00000440184 427 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AC243772.1-201ENST00000451620 410 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 RPS26P3-201ENST00000470205 348 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AC090543.2-201ENST00000483963 348 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AC004057.1-201ENST00000485827 348 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 VTA1P2-201ENST00000520205 911 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AC090819.1-201ENST00000523800 1111 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AP001804.2-201ENST00000533932 910 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AC084033.1-201ENST00000550830 633 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AC022655.2-201ENST00000577280 318 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AL161912.3-201ENST00000605404 628 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AC015722.2-201ENST00000622210 551 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AC067931.1-201ENST00000624190 671 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AL139254.3-201ENST00000641097 674 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AL451142.2-201ENST00000429076 2090 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 HSPD1P11-201ENST00000508643 1702 ntBASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RSPO3Q9BXY4 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 AC018555.1-201ENST00000567548 1980 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 AC097504.1-201ENST00000515103 2415 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 RNU6-167P-201ENST00000384292 106 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 AC093719.1-202ENST00000392735 373 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 SNORA3C-201ENST00000408792 125 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 PGBD4P8-201ENST00000412993 562 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 RPL17P36-201ENST00000420302 549 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 NANOGP6-201ENST00000429190 847 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 RNA5SP246-201ENST00000458909 119 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 AC011276.1-201ENST00000469688 323 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 RNU7-143P-201ENST00000516781 65 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 IGHV3-63-201ENST00000518422 341 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 RPL23AP87-202ENST00000573039 466 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 MIR4277-201ENST00000578298 84 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 AL445423.1-201ENST00000609941 536 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 AC245389.2-201ENST00000616023 576 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 AC242843.1-201ENST00000618702 573 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 AC233309.1-201ENST00000619522 751 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 MIR7702-201ENST00000621931 59 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 AP003072.5-201ENST00000623872 773 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 AC011944.2-201ENST00000624440 683 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 MIR6830-201ENST00000636015 70 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 AL773545.4-201ENST00000637262 310 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 AL513478.4-201ENST00000641636 310 ntBASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RSPO3Q9BXY4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms