Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 NACAP7-201ENST00000407371 609 ntBASIC5.89□□□□□ -1.47
SIN3AQ96ST3 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 FAR1P1-201ENST00000427163 934 ntBASIC5.89□□□□□ -1.47
SIN3AQ96ST3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 AL590762.3-201ENST00000436372 640 ntBASIC5.89□□□□□ -1.47
SIN3AQ96ST3 RAB9AP5-201ENST00000437794 597 ntBASIC5.89□□□□□ -1.47
SIN3AQ96ST3 RAB9AP2-201ENST00000443911 597 ntBASIC5.89□□□□□ -1.47
SIN3AQ96ST3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 AL161722.1-201ENST00000446972 1032 ntBASIC5.89□□□□□ -1.47
SIN3AQ96ST3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 PRELID3BP5-201ENST00000508612 460 ntBASIC5.89□□□□□ -1.47
SIN3AQ96ST3 AC006499.6-201ENST00000511169 607 ntBASIC5.89□□□□□ -1.47
SIN3AQ96ST3 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 MTCO1P35-201ENST00000515270 228 ntBASIC5.89□□□□□ -1.47
SIN3AQ96ST3 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 DYNLL1P4-201ENST00000549314 266 ntBASIC5.89□□□□□ -1.47
SIN3AQ96ST3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 MIR7702-201ENST00000621931 59 ntBASIC5.89□□□□□ -1.47
SIN3AQ96ST3 AC079298.2-201ENST00000623885 459 ntBASIC5.89□□□□□ -1.47
SIN3AQ96ST3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIN3AQ96ST3 HSPD1P11-201ENST00000508643 1702 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 FAM91A3P-201ENST00000456826 2544 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
SIN3AQ96ST3 SNORD35B-201ENST00000363660 87 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 OR6K3-202ENST00000368146 996 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.88□□□□□ -1.47
SIN3AQ96ST3 ATP5F1P2-201ENST00000398143 760 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 FABP12P1-201ENST00000401911 322 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 RNU4-6P-201ENST00000410804 122 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 EIF4A1P3-201ENST00000411521 244 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.88□□□□□ -1.47
SIN3AQ96ST3 AL117339.2-201ENST00000430475 180 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.88□□□□□ -1.47
SIN3AQ96ST3 AC092691.2-201ENST00000461787 803 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 RPL7P1-201ENST00000468161 747 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 RPL7P9-201ENST00000468715 747 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.88□□□□□ -1.47
SIN3AQ96ST3 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.88□□□□□ -1.47
SIN3AQ96ST3 AC134698.5-201ENST00000519444 336 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.88□□□□□ -1.47
SIN3AQ96ST3 MTND1P36-201ENST00000522384 936 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SIN3AQ96ST3 AC007224.1-201ENST00000564410 144 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 AC027281.1-201ENST00000574178 758 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 AC025627.2-201ENST00000576220 160 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.88□□□□□ -1.47
SIN3AQ96ST3 QTRT1P1-201ENST00000604344 1078 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 AC090948.2-201ENST00000607363 564 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 ZYXP1-201ENST00000617638 118 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 AC112484.5-201ENST00000624189 228 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.88□□□□□ -1.47
SIN3AQ96ST3 AC104118.1-201ENST00000607625 1589 ntBASIC5.88□□□□□ -1.47
SIN3AQ96ST3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIN3AQ96ST3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.88□□□□□ -1.47
SIN3AQ96ST3 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.88□□□□□ -1.47
SIN3AQ96ST3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 Z82217.1-201ENST00000625157 8149 ntBASIC5.87□□□□□ -1.47
SIN3AQ96ST3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 SPRR2C-201ENST00000290702 219 ntBASIC5.87□□□□□ -1.47
SIN3AQ96ST3 Y_RNA.110-201ENST00000363220 99 ntBASIC5.87□□□□□ -1.47
SIN3AQ96ST3 CYCSP10-201ENST00000417973 294 ntBASIC5.87□□□□□ -1.47
SIN3AQ96ST3 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 MRPS33P4-201ENST00000434892 317 ntBASIC5.87□□□□□ -1.47
SIN3AQ96ST3 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 AP000949.1-201ENST00000438328 629 ntBASIC5.87□□□□□ -1.47
SIN3AQ96ST3 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 AC114755.5-201ENST00000447760 831 ntBASIC5.87□□□□□ -1.47
SIN3AQ96ST3 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 RPL36AP13-201ENST00000457490 317 ntBASIC5.87□□□□□ -1.47
SIN3AQ96ST3 RPS4XP15-201ENST00000489210 795 ntBASIC5.87□□□□□ -1.47
SIN3AQ96ST3 RNU6-760P-201ENST00000516078 97 ntBASIC5.87□□□□□ -1.47
SIN3AQ96ST3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 AC015922.4-201ENST00000612568 690 ntBASIC5.87□□□□□ -1.47
SIN3AQ96ST3 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 AP005264.7-201ENST00000625003 745 ntBASIC5.87□□□□□ -1.47
SIN3AQ96ST3 AC119674.1-220ENST00000641502 1048 ntBASIC5.87□□□□□ -1.47
SIN3AQ96ST3 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.87□□□□□ -1.47
SIN3AQ96ST3 AC005332.5-201ENST00000591222 2919 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms