Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC011155.1-201ENST00000316512 456 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
C9orf72Q96LT7 MIR365B-201ENST00000362317 111 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 SNORA37-201ENST00000384504 129 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.33□□□□□ -1.72
C9orf72Q96LT7 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
C9orf72Q96LT7 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
C9orf72Q96LT7 RPL23AP4-201ENST00000427757 463 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 BX119904.1-201ENST00000432026 348 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 CEACAMP1-201ENST00000434624 1035 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
C9orf72Q96LT7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.33□□□□□ -1.72
C9orf72Q96LT7 EIF4A1P11-201ENST00000451239 222 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 PPIAP21-201ENST00000464473 501 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
C9orf72Q96LT7 RN7SL303P-201ENST00000469773 251 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 AC010618.1-201ENST00000469924 477 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 SEPT7P6-201ENST00000469999 1143 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 AC103987.1-201ENST00000473394 348 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.33□□□□□ -1.72
C9orf72Q96LT7 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
C9orf72Q96LT7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.33□□□□□ -1.72
C9orf72Q96LT7 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
C9orf72Q96LT7 OR8X1P-201ENST00000534542 869 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.33□□□□□ -1.72
C9orf72Q96LT7 AC021483.2-201ENST00000567415 758 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.33□□□□□ -1.72
C9orf72Q96LT7 AC012213.4-201ENST00000606457 354 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 MIR6716-201ENST00000613413 80 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.33□□□□□ -1.72
C9orf72Q96LT7 AC008013.2-202ENST00000637965 364 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 OR52H1-202ENST00000641796 1061 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.33□□□□□ -1.72
C9orf72Q96LT7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
C9orf72Q96LT7 AC097504.1-201ENST00000515103 2415 ntBASIC4.33□□□□□ -1.72
C9orf72Q96LT7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
C9orf72Q96LT7 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AC012020.1-201ENST00000624541 1728 ntBASIC4.32□□□□□ -1.72
C9orf72Q96LT7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 MIR331-201ENST00000362302 94 ntBASIC4.32□□□□□ -1.72
C9orf72Q96LT7 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 JKAMPP1-201ENST00000413804 919 ntBASIC4.32□□□□□ -1.72
C9orf72Q96LT7 MTCYBP7-201ENST00000419540 1134 ntBASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AC099336.2-201ENST00000422457 254 ntBASIC4.32□□□□□ -1.72
C9orf72Q96LT7 RPS20P1-201ENST00000434853 354 ntBASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AC099560.2-201ENST00000457554 255 ntBASIC4.32□□□□□ -1.72
C9orf72Q96LT7 RN7SL98P-201ENST00000462271 300 ntBASIC4.32□□□□□ -1.72
C9orf72Q96LT7 RPS26P15-201ENST00000488067 348 ntBASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AC138701.1-201ENST00000524329 714 ntBASIC4.32□□□□□ -1.72
C9orf72Q96LT7 TOMM20P2-201ENST00000540082 421 ntBASIC4.32□□□□□ -1.72
C9orf72Q96LT7 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AC090948.2-201ENST00000607363 564 ntBASIC4.32□□□□□ -1.72
C9orf72Q96LT7 NF1P10-201ENST00000613227 742 ntBASIC4.32□□□□□ -1.72
C9orf72Q96LT7 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AC074276.2-201ENST00000619891 348 ntBASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AC095038.2-201ENST00000621464 1070 ntBASIC4.32□□□□□ -1.72
C9orf72Q96LT7 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AL356489.2-201ENST00000566968 3528 ntBASIC4.32□□□□□ -1.72
C9orf72Q96LT7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.31□□□□□ -1.72
C9orf72Q96LT7 BX005019.1-201ENST00000561881 1810 ntBASIC4.31□□□□□ -1.72
C9orf72Q96LT7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 OR6C69P-201ENST00000394268 893 ntBASIC4.31□□□□□ -1.72
C9orf72Q96LT7 AL356967.1-201ENST00000406305 431 ntBASIC4.31□□□□□ -1.72
C9orf72Q96LT7 RPL23AP48-201ENST00000406913 488 ntBASIC4.31□□□□□ -1.72
C9orf72Q96LT7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 EIF1P3-201ENST00000423841 334 ntBASIC4.31□□□□□ -1.72
C9orf72Q96LT7 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.31□□□□□ -1.72
C9orf72Q96LT7 AL158073.1-201ENST00000426848 1104 ntBASIC4.31□□□□□ -1.72
C9orf72Q96LT7 UBE2V2P1-201ENST00000434717 398 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms