Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC011447.7-201ENST00000624228 1590 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC073136.1-201ENST00000449426 2884 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AL079342.2-201ENST00000403367 482 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 RN7SKP273-201ENST00000411392 314 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AL008987.1-201ENST00000415528 237 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AL031663.1-201ENST00000437445 219 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 CBX1P4-201ENST00000439415 457 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 PTMAP3-201ENST00000447474 330 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 IGHV5-78-201ENST00000450948 295 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC023424.1-201ENST00000496058 459 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC113347.3-201ENST00000509113 148 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 SCARNA21.2-201ENST00000516600 166 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 HMGB1P23-201ENST00000518743 568 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC012339.2-201ENST00000523996 453 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC044913.1-201ENST00000557200 430 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 NIFKP8-201ENST00000560500 874 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AP001269.3-201ENST00000588718 329 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 BNIP3P24-201ENST00000593398 557 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AP000238.1-201ENST00000608759 426 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 BX005214.3-202ENST00000619809 325 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC009039.2-201ENST00000624524 529 ntBASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP3Q96JB5 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AC093591.2-201ENST00000565254 3843 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AC005332.5-201ENST00000591222 2919 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 RNU6-317P-201ENST00000384031 107 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 MIR323B-201ENST00000385269 82 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 Z97832.1-201ENST00000402490 328 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 SNORA11C-201ENST00000408532 129 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AC104333.2-201ENST00000422630 192 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 MTND5P25-201ENST00000430499 799 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 RPS29P9-201ENST00000440360 171 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 OR7E125P-201ENST00000443450 846 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 MTND2P22-201ENST00000444325 1033 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 TCEA1P1-201ENST00000449716 880 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AL935212.3-201ENST00000450729 284 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AC233982.1-201ENST00000451247 436 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AL691482.1-201ENST00000453255 87 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AC005532.2-201ENST00000467154 373 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 CCDC75P1-201ENST00000469247 791 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AC090114.3-201ENST00000479267 829 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AC073522.1-201ENST00000483312 377 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 SNORA3.4-201ENST00000515969 96 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AC090695.1-201ENST00000561269 1222 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AC009094.1-201ENST00000564443 426 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AC006116.3-201ENST00000592968 361 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AP000894.4-201ENST00000610185 483 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.63□□□□□ -1.51
CDK5RAP3Q96JB5 AC019206.1-201ENST00000621938 425 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms