Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 AC067945.1-201ENST00000342609 618 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 RNU1-15P-201ENST00000353977 144 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 MT-TP-201ENST00000387461 68 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 AL603766.1-201ENST00000407763 664 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 RNU6-603P-201ENST00000411403 107 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 AL161631.1-201ENST00000417933 486 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 RPL23AP38-201ENST00000423801 469 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 AC073335.1-201ENST00000427776 363 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 COX6B1P7-201ENST00000430845 235 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 CALM1P2-201ENST00000452941 448 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 RPL31P53-201ENST00000457065 348 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 AC079804.1-201ENST00000461922 436 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 RPL7AP28-201ENST00000464513 571 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 VTA1P2-201ENST00000520205 911 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 AC105233.3-201ENST00000531125 744 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 NPM1P35-201ENST00000533043 868 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 AC124068.1-201ENST00000563131 678 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 RN7SL600P-201ENST00000581811 299 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 MIR492-201ENST00000638676 116 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.24□□□□□ -1.73
ECHDC3Q96DC8 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 SNORA70C-201ENST00000384538 135 ntBASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 LAP3P1-201ENST00000403648 294 ntBASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 RN7SKP33-201ENST00000410942 340 ntBASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 PDSS1P1-201ENST00000422953 1114 ntBASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 PRELID3BP10-201ENST00000431957 584 ntBASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 AL121877.1-201ENST00000453704 622 ntBASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 RPL7P19-201ENST00000469948 618 ntBASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 PPM1AP1-201ENST00000502740 1135 ntBASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 AC027281.1-201ENST00000574178 758 ntBASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 AC079298.2-201ENST00000623885 459 ntBASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 AC114546.3-201ENST00000623582 1734 ntBASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ECHDC3Q96DC8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 RNU6-670P-201ENST00000364312 104 ntBASIC4.22□□□□□ -1.73
ECHDC3Q96DC8 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms