Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RNU2-62P-201ENST00000410868 191 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 NPM1P40-201ENST00000412758 733 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 NDUFB4P5-201ENST00000415445 361 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 MTCO2P27-201ENST00000420740 428 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AL451054.2-201ENST00000420896 202 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 HSPE1P1-201ENST00000421494 318 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AL031736.2-201ENST00000426573 787 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AL138479.1-201ENST00000426913 484 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 TIMM9P1-201ENST00000436122 256 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 NANOGP10-201ENST00000453325 895 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AC013429.1-201ENST00000456604 422 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 RN7SL251P-201ENST00000464175 297 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AC068522.1-201ENST00000482895 345 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AC021382.1-201ENST00000483523 359 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 RN7SL516P-201ENST00000496127 297 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 MTCO1P29-201ENST00000496868 288 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AC008967.1-201ENST00000504843 163 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 BTF3P13-201ENST00000513224 490 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AC093853.1-201ENST00000515689 483 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AC100784.1-201ENST00000522790 310 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 EIF4A2P5-201ENST00000529914 499 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 FXNP1-201ENST00000555153 337 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 RPL21P12-201ENST00000559810 515 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AC010424.2-201ENST00000607594 443 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AL121809.2-201ENST00000613169 341 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 AC005225.5-201ENST00000623547 2225 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 KYNUP1-201ENST00000466683 1406 ntBASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
DEPDC4Q8N2C3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 DDX50P1-201ENST00000438163 2400 ntBASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 RNA5SP448-201ENST00000363151 111 ntBASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 MIR454-201ENST00000390180 115 ntBASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AC113608.1-201ENST00000398740 305 ntBASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AC099535.1-201ENST00000408928 371 ntBASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 FHP1-201ENST00000442741 703 ntBASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AL353803.3-201ENST00000444641 335 ntBASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 PPP1R2P5-201ENST00000457256 603 ntBASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AP001992.1-205ENST00000462248 379 ntBASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AC093767.1-201ENST00000504523 156 ntBASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 OR4D12P-201ENST00000509361 911 ntBASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 RNA5SP116-201ENST00000516132 98 ntBASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AC011979.2-201ENST00000527568 352 ntBASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AL358913.1-201ENST00000554342 121 ntBASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
DEPDC4Q8N2C3 MIR4504-201ENST00000577413 92 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms