Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RNA5SP505-201ENST00000364748 108 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 AL583835.1-201ENST00000399570 407 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 AC093698.1-201ENST00000423843 571 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 RPS26P47-201ENST00000427219 348 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 CALM1P2-201ENST00000452941 448 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 RN7SL585P-201ENST00000470538 280 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 STRADBP1-201ENST00000478954 1281 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 OR52A4P-203ENST00000498233 1014 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 PRELID3BP7-201ENST00000503606 469 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 AC006064.5-201ENST00000541782 248 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 AL109766.1-201ENST00000555080 552 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 AC027176.2-201ENST00000559166 746 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 AC092868.3-201ENST00000560515 784 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 AC244505.7-201ENST00000599675 272 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 HMGB1P51-201ENST00000605166 638 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 AC025175.1-201ENST00000606482 759 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 RN7SL722P-201ENST00000617780 284 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 RN7SL565P-201ENST00000618246 284 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 MTND4P10-201ENST00000446199 1363 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 MAPK10-373ENST00000641983 6772 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 AC025031.4-201ENST00000621248 3271 ntBASIC4.47□□□□□ -1.69
CCDC50Q8IVM0 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
CCDC50Q8IVM0 AC110792.3-201ENST00000595906 1614 ntBASIC4.46□□□□□ -1.69
CCDC50Q8IVM0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 OR5P1P-201ENST00000299512 925 ntBASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 FAM3C2-201ENST00000312214 681 ntBASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 MIR423-201ENST00000362201 94 ntBASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AL365396.1-201ENST00000430854 671 ntBASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 MTND2P28-201ENST00000457540 1044 ntBASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AC104164.2-201ENST00000496953 495 ntBASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AC010374.1-201ENST00000503762 1237 ntBASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 MIR4644-201ENST00000579929 84 ntBASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AC020915.5-201ENST00000596836 964 ntBASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AC068790.7-201ENST00000602347 528 ntBASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AC115286.1-201ENST00000604298 434 ntBASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AC034236.3-201ENST00000605999 461 ntBASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AC090948.2-201ENST00000607363 564 ntBASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 MIR6780A-201ENST00000615089 68 ntBASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 uc_338.13-201ENST00000618243 179 ntBASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 MIR7703-201ENST00000620784 77 ntBASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AC092159.4-201ENST00000624944 550 ntBASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC50Q8IVM0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CCDC50Q8IVM0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC50Q8IVM0 OR56B2P-202ENST00000641377 2453 ntBASIC4.45□□□□□ -1.7
CCDC50Q8IVM0 RNU6-152P-201ENST00000384037 107 ntBASIC4.45□□□□□ -1.7
CCDC50Q8IVM0 RPS16P5-201ENST00000406501 404 ntBASIC4.45□□□□□ -1.7
CCDC50Q8IVM0 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC50Q8IVM0 AC115285.1-201ENST00000424879 736 ntBASIC4.45□□□□□ -1.7
CCDC50Q8IVM0 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC50Q8IVM0 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC50Q8IVM0 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC50Q8IVM0 RPL23AP52-201ENST00000439311 478 ntBASIC4.45□□□□□ -1.7
CCDC50Q8IVM0 AL356535.1-201ENST00000440335 398 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms