Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 YWHABP2-201ENST00000540201 713 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 CYP2C60P-201ENST00000566088 139 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC008814.1-201ENST00000603797 406 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC073387.2-201ENST00000604797 784 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AP002802.2-201ENST00000605877 235 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AL157392.4-201ENST00000609756 345 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC108359.1-201ENST00000616451 1211 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AL023881.1-201ENST00000621088 301 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC023510.2-201ENST00000622162 746 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC116563.2-201ENST00000624751 535 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC139713.2-210ENST00000641741 992 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AL731532.2-201ENST00000623542 1953 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 AC000374.1-201ENST00000434698 1745 ntBASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.23□□□□□ -1.73
PDLIM3Q53GG5 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 RNU6-543P-201ENST00000362576 108 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 RN7SKP104-201ENST00000362605 328 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 RNA5SP123-201ENST00000363244 119 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 ATP5F1P2-201ENST00000398143 760 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 YWHAEP5-201ENST00000431545 765 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 BMS1P19-201ENST00000433925 393 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 KCTD10P1-201ENST00000434203 625 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 GSTM5P1-201ENST00000434751 660 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 EEF1A1P1-201ENST00000447052 739 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AC005002.1-201ENST00000447458 540 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 OR51B8P-201ENST00000449892 769 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AL009048.1-201ENST00000450437 298 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AC020890.1-201ENST00000491837 504 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AC010460.2-201ENST00000509054 677 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AC104108.1-201ENST00000509930 412 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 DYNLL1P4-201ENST00000549314 266 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 MTCYBP23-201ENST00000558717 1102 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 MIR4270-201ENST00000581799 70 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 MIR3936-201ENST00000584304 110 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AC018754.1-201ENST00000607486 925 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AL355816.1-201ENST00000607951 118 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 U6.48-201ENST00000618523 106 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AC000123.2-201ENST00000623124 461 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AL731566.1-201ENST00000620490 1937 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 INTS6P1-201ENST00000504674 2530 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 AL031119.1-201ENST00000404707 1879 ntBASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PDLIM3Q53GG5 ZNF652P1-201ENST00000442420 1309 ntBASIC4.21□□□□□ -1.73
PDLIM3Q53GG5 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.21□□□□□ -1.73
PDLIM3Q53GG5 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
PDLIM3Q53GG5 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.21□□□□□ -1.73
PDLIM3Q53GG5 AL137100.1-201ENST00000556703 1620 ntBASIC4.21□□□□□ -1.73
PDLIM3Q53GG5 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
PDLIM3Q53GG5 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PDLIM3Q53GG5 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM3Q53GG5 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDLIM3Q53GG5 OR14L1P-202ENST00000641545 3009 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms